RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 DUX1O43812 170 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 VEGFDO43915 354 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 C1QL1O75973 258 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 ANXA9O76027 345 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 TJP3O95049 919 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 PRSS56P0CW18 603 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 TYRP1P17643 537 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 TPH1P17752 444 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 MLLT3P42568 568 aaPredicted RBP10.44□□□□□ -0.74
NELFE-213ENST00000494956 TNNT3P45378 269 aaPredicted RBP10.44□□□□□ -0.74
NELFE-213ENST00000494956 CDKN1CP49918 316 aaPredicted RBP10.44□□□□□ -0.74
NELFE-213ENST00000494956 CLCNKAP51800 687 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 VAC14Q08AM6 782 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 KLF1Q13351 362 aaPredicted RBP10.44□□□□□ -0.74
NELFE-213ENST00000494956 NFE2L1Q14494 772 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 ITPRIPL1Q6GPH6 555 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 CCDC81Q6ZN84 652 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 FAM129CQ86XR2 697 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 GPR150Q8NGU9 434 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 OR10G6Q8NH81 332 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 SLC39A7Q92504 469 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 SGF29Q96ES7 293 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 UBL7Q96S82 380 aaPredicted RBP10.44□□□□□ -0.74
NELFE-213ENST00000494956 TBL1YQ9BQ87 522 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 TRABDQ9H4I3 376 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 APMAPQ9HDC9 416 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 HACD3Q9P035 362 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 IMPACTQ9P2X3 320 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 GUCA1BQ9UMX6 200 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 B3GALT1Q9Y5Z6 326 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 CFAP20Q9Y6A4 193 aaKnown RBP10.44□□□□□ -0.74
NELFE-213ENST00000494956 AHCTF1Q8WYP5 2266 aa10.44□□□□□ -0.74
NELFE-213ENST00000494956 KIR2DS5A0A0G2JLQ3 304 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 A0A0G2JNG1 304 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 TEX51A0A1B0GUA7 166 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 K7ENP7 123 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 KIR2DS3K7RE56 304 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 ATXN7O15265 892 aaPredicted RBP10.43□□□□□ -0.74
NELFE-213ENST00000494956 POP7O75817 140 aaKnown RBP10.43□□□□□ -0.74
NELFE-213ENST00000494956 PRAMEF1O95521 474 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 VIPP01282 170 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 PTMAP06454 111 aaKnown RBP10.43□□□□□ -0.74
NELFE-213ENST00000494956 ETS1P14921 441 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 XRCC1P18887 633 aaPredicted RBP10.43□□□□□ -0.74
NELFE-213ENST00000494956 LPOP22079 712 aaPredicted RBP10.43□□□□□ -0.74
NELFE-213ENST00000494956 CSTF2P33240 577 aaKnown RBP eCLIP10.43□□□□□ -0.74
NELFE-213ENST00000494956 CETN2P41208 172 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 LEPRP48357 1165 aaKnown RBP10.43□□□□□ -0.74
NELFE-213ENST00000494956 PPP1CAP62136 330 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 GPLD1P80108 840 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 XIAPP98170 497 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 SQSTM1Q13501 440 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 GTF2H3Q13889 308 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 LY6DQ14210 128 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 PRPSAP1Q14558 356 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 KIR2DS5Q14953 304 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 TAF1AQ15573 450 aaPredicted RBP10.43□□□□□ -0.74
NELFE-213ENST00000494956 FNBP1LQ5T0N5 605 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 ANKS6Q68DC2 871 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 DUS1LQ6P1R4 473 aaKnown RBP10.43□□□□□ -0.74
NELFE-213ENST00000494956 INO80CQ6PI98 192 aaPredicted RBP10.43□□□□□ -0.74
NELFE-213ENST00000494956 XKR5Q6UX68 686 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 TMEM26Q6ZUK4 368 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 ARHGAP22Q7Z5H3 698 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 LILRA3Q8N6C8 439 aaPredicted RBP10.43□□□□□ -0.74
NELFE-213ENST00000494956 UBL4BQ8N7F7 174 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 DDHD1Q8NEL9 900 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 ZNF398Q8TD17 642 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 HES6Q96HZ4 224 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 CALR3Q96L12 384 aaKnown RBP10.43□□□□□ -0.74
NELFE-213ENST00000494956 TTC25Q96NG3 672 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 CCNL2Q96S94 520 aaPredicted RBP10.43□□□□□ -0.74
NELFE-213ENST00000494956 SRPK1Q96SB4 655 aaKnown RBP10.43□□□□□ -0.74
NELFE-213ENST00000494956 TIMM29Q9BSF4 260 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 SEMA4CQ9C0C4 833 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 ASB8Q9H765 288 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 SLC39A1Q9NY26 324 aa10.43□□□□□ -0.74
NELFE-213ENST00000494956 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.43□□□□□ -0.74
NELFE-213ENST00000494956 AKAP7Q9P0M2 348 aaPredicted RBP10.43□□□□□ -0.74
NELFE-213ENST00000494956 C5orf60A6NFR6 353 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 GPR89AB7ZAQ6 455 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 HGSO14964 777 aaPredicted RBP10.42□□□□□ -0.74
NELFE-213ENST00000494956 ZW10O43264 779 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 LDB2O43679 373 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 SGTAO43765 313 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 KIF1CO43896 1103 aaKnown RBP10.42□□□□□ -0.74
NELFE-213ENST00000494956 SRP72O76094 671 aaKnown RBP10.42□□□□□ -0.74
NELFE-213ENST00000494956 STK10O94804 968 aaKnown RBP10.42□□□□□ -0.74
NELFE-213ENST00000494956 GPR89BP0CG08 455 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 LIPCP11150 499 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 SLC2A4P14672 509 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 MSH3P20585 1137 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 IDSP22304 550 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 AKT1P31749 480 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 ZNF140P52738 457 aaPredicted RBP10.42□□□□□ -0.74
NELFE-213ENST00000494956 CYP4F2P78329 520 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 GPR18Q14330 331 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 LDLRAP1Q5SW96 308 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 KCTD11Q693B1 232 aa10.42□□□□□ -0.74
NELFE-213ENST00000494956 ABRAXAS1Q6UWZ7 409 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms