RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 GPBAR1Q8TDU6 330 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 SYNDIG1Q9H7V2 258 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 TRNAU1APQ9NX07 287 aaKnown RBP10.96□□□□□ -0.65
APTX-230ENST00000494649 TOR4AQ9NXH8 423 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 SLC17A6Q9P2U8 582 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 DMGDHQ9UI17 866 aaKnown RBP10.96□□□□□ -0.65
APTX-230ENST00000494649 PSMD13Q9UNM6 376 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 U3KQA8 63 aa10.96□□□□□ -0.65
APTX-230ENST00000494649 AGAP14A8MT82 685 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 IQCF5A8MTL0 148 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 AGRPO00253 132 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 CD3EAPO15446 510 aaKnown RBP10.96□□□□□ -0.66
APTX-230ENST00000494649 POP7O75817 140 aaKnown RBP10.96□□□□□ -0.66
APTX-230ENST00000494649 PIAS1O75925 651 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 TOP3BO95985 862 aaKnown RBP10.96□□□□□ -0.66
APTX-230ENST00000494649 CEACAM1P13688 526 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 ATP1B2P14415 290 aaPredicted RBP10.96□□□□□ -0.66
APTX-230ENST00000494649 ZNF7P17097 686 aaPredicted RBP10.96□□□□□ -0.66
APTX-230ENST00000494649 CSRP1P21291 193 aaKnown RBP10.96□□□□□ -0.66
APTX-230ENST00000494649 SDHBP21912 280 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 CSE1LP55060 971 aaKnown RBP10.96□□□□□ -0.66
APTX-230ENST00000494649 ACVR1Q04771 509 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 LAMB3Q13751 1172 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 PROX2Q3B8N5 592 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 ZCCHC8Q6NZY4 707 aaKnown RBP10.96□□□□□ -0.66
APTX-230ENST00000494649 FAM83HQ6ZRV2 1179 aaPredicted RBP10.96□□□□□ -0.66
APTX-230ENST00000494649 C11orf96Q7Z7L8 435 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 CCDC25Q86WR0 208 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 MNS1Q8NEH6 495 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 FBXO25Q8TCJ0 367 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 ZDHHC1Q8WTX9 485 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 SCG3Q8WXD2 468 aaKnown RBP10.96□□□□□ -0.66
APTX-230ENST00000494649 ULK4Q96C45 1275 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 DUSP23Q9BVJ7 150 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 ZCCHC2Q9C0B9 1178 aaKnown RBP10.96□□□□□ -0.66
APTX-230ENST00000494649 C20orf96Q9NUD7 363 aaPredicted RBP10.96□□□□□ -0.66
APTX-230ENST00000494649 ZDHHC3Q9NYG2 299 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 CFAP20Q9Y6A4 193 aaKnown RBP10.96□□□□□ -0.66
APTX-230ENST00000494649 CSNK1G3Q9Y6M4 447 aa10.96□□□□□ -0.66
APTX-230ENST00000494649 ARHGEF17Q96PE2 2063 aaPredicted RBP10.95□□□□□ -0.66
APTX-230ENST00000494649 TRBV5-4A0A0C4DH59 114 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 PRAMEF33A0A0G2JMD5 474 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 ZCWPW2A0A1B0GU75 182 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 UBA6A0AVT1 1052 aaPredicted RBP10.95□□□□□ -0.66
APTX-230ENST00000494649 PDZK1P1A8MUH7 402 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 KMOO15229 486 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 SGTAO43765 313 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 POLBP06746 335 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 RHOXF2BP0C7M4 288 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 FTH1P19P0C7X4 201 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 ERVK-10P10266 1014 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 SPINK2P20155 84 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 PMLP29590 882 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 ARL4CP56559 192 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 CTBP1Q13363 440 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 GPR33Q49SQ1 333 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 DHRS13Q6UX07 377 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 DENND6AQ8IWF6 608 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 ZBED8Q8IZ13 594 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 NAGSQ8N159 534 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 RHOXF2Q9BQY4 288 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 RAB17Q9H0T7 212 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 EPB41L5Q9HCM4 733 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 PPANQ9NQ55 473 aaKnown RBP10.95□□□□□ -0.66
APTX-230ENST00000494649 SCHIP1Q9P0W5 487 aaPredicted RBP10.95□□□□□ -0.66
APTX-230ENST00000494649 RABGEF1Q9UJ41 708 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 CRYL1Q9Y2S2 319 aa10.95□□□□□ -0.66
APTX-230ENST00000494649 FAM237BA0A1B0GVD1 139 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 OR52A4PA6NMU1 304 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 CFAP99D6REC4 459 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 TNFSF14O43557 240 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 NOBOXO60393 691 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 RALBP11234 206 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 ABCG1P45844 678 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 ARCN1P48444 511 aaKnown RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 CRYMQ14894 314 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 HSP90AA5PQ58FG0 334 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 DNAJC21Q5F1R6 531 aaKnown RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 ZNF789Q5FWF6 425 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 PERM1Q5SV97 790 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 ZNF470Q6ECI4 717 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 TMEM135Q86UB9 458 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 AMZ2Q86W34 360 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 KRT222Q8N1A0 295 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 ARL10Q8N8L6 244 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 Q8N9G6 341 aaPredicted RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 FBXO36Q8NEA4 188 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 SPDYE1Q8NFV5 336 aaPredicted RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 DTX3LQ8TDB6 740 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 IFT81Q8WYA0 676 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.94□□□□□ -0.66
APTX-230ENST00000494649 CDC6Q99741 560 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 EBNA1BP2Q99848 306 aaKnown RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 RMI1Q9H9A7 625 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 MRM3Q9HC36 420 aaKnown RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 SAYSD1Q9NPB0 183 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 WHRNQ9P202 907 aa10.94□□□□□ -0.66
APTX-230ENST00000494649 ZC3H7BQ9UGR2 993 aaKnown RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 TSR3Q9UJK0 312 aaKnown RBP10.94□□□□□ -0.66
APTX-230ENST00000494649 WDR37Q9Y2I8 494 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms