RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 IL10P22301 178 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 POLR2JP52435 117 aaKnown RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 CDH18Q13634 790 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 INPP5AQ14642 412 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 SLC5A9Q2M3M2 681 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 XKR7Q5GH72 579 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 C6orf136Q5SQH8 315 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 ARMC12Q5T9G4 340 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 TXNDC8Q6A555 127 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 FAM117BQ6P1L5 589 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 RBM44Q6ZP01 1051 aaKnown RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 EFL1Q7Z2Z2 1120 aaKnown RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 APCDD1Q8J025 514 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 METTL25Q8N6Q8 603 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 AUTS2Q8WXX7 1259 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 CAPNS2Q96L46 248 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 TMEM74Q96NL1 305 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 BOCQ9BWV1 1114 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 SLC2A11Q9BYW1 496 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 TRIM15Q9C019 465 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 CIPCQ9C0C6 399 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 P2RY12Q9H244 342 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 ZNF696Q9H7X3 374 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 RIC8BQ9NVN3 520 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 ARMC1Q9NVT9 282 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 EVLQ9UI08 416 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-209ENST00000494623 ZMYM5Q9UJ78 669 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 DHRS7Q9Y394 339 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 RNF11Q9Y3C5 154 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 PCDHA9Q9Y5H5 950 aa11.08□□□□□ -0.64
CHMP3-209ENST00000494623 AQP12BA6NM10 295 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 GOLGA8CPA6NN73 597 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 PITPNM1O00562 1244 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 SOCS2O14508 198 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 FZD6O60353 706 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 TRIM16O95361 564 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 CAPN1P07384 714 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 SPATA31D3P0C874 917 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 ERVK-8P63133 956 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 ZXDBP98169 803 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 PLOD1Q02809 727 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-209ENST00000494623 NADK2Q4G0N4 442 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 TIGD2Q4W5G0 525 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 LETMD1Q6P1Q0 360 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 IL27RAQ6UWB1 636 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 Q6ZSR9 355 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 SPATA31D4Q6ZUB0 917 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 ERMP1Q7Z2K6 904 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 TMCO2Q7Z6W1 182 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-209ENST00000494623 SERPINA9Q86WD7 417 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 AQP12AQ8IXF9 295 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 CLDN19Q8N6F1 224 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 NUDT8Q8WV74 236 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 TMEM125Q96AQ2 219 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 OSBPL11Q9BXB4 747 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 MRPS26Q9BYN8 205 aaKnown RBP11.07□□□□□ -0.64
CHMP3-209ENST00000494623 PFDN4Q9NQP4 134 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 PLK2Q9NYY3 685 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 ANKRD36A6QL64 1941 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 PDLIM1O00151 329 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 ARPC2O15144 300 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 INPP4BO15327 924 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 HTRA2O43464 458 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-209ENST00000494623 EFEMP2O95967 443 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 CNPP09543 421 aaKnown RBP11.07□□□□□ -0.64
CHMP3-209ENST00000494623 BMP2P12643 396 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 CD9P21926 228 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 UGT1A1P22309 533 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 UGT1A4P22310 534 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 IL12AP29459 219 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 UGT1A3P35503 534 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 UGT1A5P35504 534 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 HMGCLP35914 325 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 ZFP36L2P47974 494 aaKnown RBP11.07□□□□□ -0.64
CHMP3-209ENST00000494623 GSK3BP49841 420 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 HTR6P50406 440 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 SEMG2Q02383 582 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 LIPEQ05469 1076 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 BNIP2Q12982 314 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.07□□□□□ -0.64
CHMP3-209ENST00000494623 ATP6AP1LQ52LC2 224 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 TMEM150AQ86TG1 271 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 CHERPQ8IWX8 916 aaKnown RBP11.07□□□□□ -0.64
CHMP3-209ENST00000494623 STK40Q8N2I9 435 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 ANKFN1Q8N957 763 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 ZFAND2BQ8WV99 257 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 PIH1D2Q8WWB5 315 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 DGCR14Q96DF8 476 aaKnown RBP11.07□□□□□ -0.64
CHMP3-209ENST00000494623 MYO19Q96H55 970 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 ZFRQ96KR1 1074 aaKnown RBP11.07□□□□□ -0.64
CHMP3-209ENST00000494623 CLPBQ9H078 707 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 HIPK3Q9H422 1215 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 ALG2Q9H553 416 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 ASB8Q9H765 288 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 CAAP1Q9H8G2 361 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 MAGEE1Q9HCI5 957 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 NDUFA13Q9P0J0 144 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 ACTR3BQ9P1U1 418 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 SUN2Q9UH99 717 aa11.07□□□□□ -0.64
CHMP3-209ENST00000494623 OR51B4Q9Y5P0 310 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms