RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 PRRG3Q9BZD7 231 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 KAT8Q9H7Z6 458 aaKnown RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 SLC38A10Q9HBR0 1119 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 TRMT13Q9NUP7 481 aaKnown RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 TOR4AQ9NXH8 423 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 STMN3Q9NZ72 180 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 MAT2BQ9NZL9 334 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 EHD3Q9NZN3 535 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 SCAF8Q9UPN6 1271 aaKnown RBP10.04□□□□□ -0.8
LINC00488-201ENST00000494582 MYLKQ15746 1914 aa10.04□□□□□ -0.8
LINC00488-201ENST00000494582 A0A1W2PP18 115 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 A0A1W2PQ72 361 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 YDJCA8MPS7 323 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 FAM72CH0Y354 149 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 PPEF1O14829 653 aaPredicted RBP10.03□□□□□ -0.8
LINC00488-201ENST00000494582 HCRTO43612 131 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 B4GALT4O60513 344 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 SIX3O95343 332 aaPredicted RBP10.03□□□□□ -0.8
LINC00488-201ENST00000494582 MATN4O95460 622 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 NAT2P11245 290 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 CYP4B1P13584 511 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 HGFP14210 728 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 HTR1EP28566 365 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 PKLRP30613 574 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 RFX2P48378 723 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 EEFSECP57772 596 aaKnown RBP10.03□□□□□ -0.8
LINC00488-201ENST00000494582 UFM1P61960 85 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 FOXM1Q08050 763 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 TRAF3Q13114 568 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 PARP15Q460N3 678 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 FAM72AQ5TYM5 149 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 RAP1GAP2Q684P5 730 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 FAM72DQ6L9T8 149 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 TUBA3EQ6PEY2 450 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 GALNT5Q7Z7M9 940 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 VSIG10LQ86VR7 867 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 FAM72BQ86X60 149 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 BRSK1Q8TDC3 778 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 NSUN6Q8TEA1 469 aaKnown RBP10.03□□□□□ -0.8
LINC00488-201ENST00000494582 TWIST2Q8WVJ9 160 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 PIK3R3Q92569 461 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 SNAPC3Q92966 411 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 ZNF566Q969W8 418 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 ISG20Q96AZ6 181 aaKnown RBP10.03□□□□□ -0.8
LINC00488-201ENST00000494582 PRMT6Q96LA8 375 aaPredicted RBP10.03□□□□□ -0.8
LINC00488-201ENST00000494582 BARD1Q99728 777 aaKnown RBP10.03□□□□□ -0.8
LINC00488-201ENST00000494582 MUC13Q9H3R2 512 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 SETD4Q9NVD3 440 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 ERVK13-1Q9NX77 482 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 TAS2R9Q9NYW1 312 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 COQ3Q9NZJ6 369 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 POLG2Q9UHN1 485 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 FZD10Q9ULW2 581 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 WBP11Q9Y2W2 641 aaKnown RBP10.03□□□□□ -0.8
LINC00488-201ENST00000494582 GPR45Q9Y5Y3 372 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 BRCA1P38398 1863 aaKnown RBP10.03□□□□□ -0.8
LINC00488-201ENST00000494582 SYNJ2BP-COX16A0A087WUM0 186 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 B8ZZF3 427 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 TRIM77I1YAP6 450 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 CAPN5O15484 640 aaPredicted RBP10.03□□□□□ -0.8
LINC00488-201ENST00000494582 PRKD3O94806 890 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 CDK14O94921 469 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 NR3C2P08235 984 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 RAP2AP10114 183 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 IFI30P13284 250 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 POLR2CP19387 275 aaPredicted RBP10.03□□□□□ -0.8
LINC00488-201ENST00000494582 NOS2P35228 1153 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 ARL4AP40617 200 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 ST13P50502 369 aaKnown RBP10.03□□□□□ -0.8
LINC00488-201ENST00000494582 ARPP19P56211 112 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 MTPNP58546 118 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 POU6F2P78424 691 aaPredicted RBP10.03□□□□□ -0.8
LINC00488-201ENST00000494582 LAPTM4AQ15012 233 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 ZNF678Q5SXM1 525 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 TMEM207Q6UWW9 146 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 FBXO30Q8TB52 745 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 ITFG1Q8TB96 612 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 RNF139Q8WU17 664 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 UBE2FQ969M7 185 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 RMDN1Q96DB5 314 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 ACOX2Q99424 681 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 KIFC1Q9BW19 673 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 ROGDIQ9GZN7 287 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 C12orf10Q9HB07 376 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 FKBP14Q9NWM8 211 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 COX16Q9P0S2 106 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 ARIH1Q9Y4X5 557 aaPredicted RBP10.03□□□□□ -0.8
LINC00488-201ENST00000494582 RIPK3Q9Y572 518 aa10.03□□□□□ -0.8
LINC00488-201ENST00000494582 LRRC37AA6NMS7 1700 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 NUP205Q92621 2012 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 ZNF831Q5JPB2 1677 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 SCN9AQ15858 1988 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 COL16A1Q07092 1604 aaPredicted RBP10.02□□□□□ -0.8
LINC00488-201ENST00000494582 A0A087WZ62 844 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 OR2A25A4D2G3 310 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 BCKDKO14874 412 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 CPNE3O75131 537 aaKnown RBP10.02□□□□□ -0.8
LINC00488-201ENST00000494582 SUPT20HL2P0C7V6 817 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 M6PRP20645 277 aa10.02□□□□□ -0.8
LINC00488-201ENST00000494582 GADD45AP24522 165 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms