RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 CHSY3Q70JA7 882 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 KIRREL3Q8IZU9 778 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 AFAP1L2Q8N4X5 818 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 CEP70Q8NHQ1 597 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 HCAR2Q8TDS4 363 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 TRPC4APQ8TEL6 797 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 AGAP11Q8TF27 550 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 ZNF483Q8TF39 744 aaPredicted RBP16.32■□□□□ 0.2
ATG4B-225ENST00000494465 MRPL38Q96DV4 380 aaKnown RBP16.32■□□□□ 0.2
ATG4B-225ENST00000494465 COPS8Q99627 209 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 MID1IP1Q9NPA3 183 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 PKD2L2Q9NZM6 624 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 DEC1Q9P2X7 70 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 PCTPQ9UKL6 214 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 SARDHQ9UL12 918 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 LRRK1Q38SD2 2015 aa16.32■□□□□ 0.2
ATG4B-225ENST00000494465 C16orf96A6NNT2 1141 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 COX4I1P13073 169 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 PIK3R1P27986 724 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 HYAL1Q12794 435 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 POM121L1PQ3SYA9 428 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 ANKS6Q68DC2 871 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 TXNDC11Q6PKC3 985 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 CLYBLQ8N0X4 340 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 ZBTB2Q8N680 514 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 MARK4Q96L34 752 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 TSR3Q9UJK0 312 aaKnown RBP16.31■□□□□ 0.2
ATG4B-225ENST00000494465 G3BP2Q9UN86 482 aaKnown RBP16.31■□□□□ 0.2
ATG4B-225ENST00000494465 DNAJC15Q9Y5T4 150 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 LOC100653049A0A140TA62 436 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 SLC22A2O15244 555 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 KRT34O76011 436 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 WFS1O76024 890 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 PGM1P36871 562 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 DCDC1P59894 354 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 ST8SIA6P61647 398 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 LCP2Q13094 533 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 PDGFRLQ15198 375 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 RAB30Q15771 203 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 KANK2Q63ZY3 851 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 Q6ZVL8 140 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 PARS2Q7L3T8 475 aaKnown RBP16.31■□□□□ 0.2
ATG4B-225ENST00000494465 SCAMP4Q969E2 229 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 MCUR1Q96AQ8 359 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 ULK4Q96C45 1275 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 SLC28A3Q9HAS3 691 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 SPATS2LQ9NUQ6 558 aaKnown RBP16.31■□□□□ 0.2
ATG4B-225ENST00000494465 SMOXQ9NWM0 555 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 UTP6Q9NYH9 597 aaKnown RBP16.31■□□□□ 0.2
ATG4B-225ENST00000494465 TMCO1Q9UM00 188 aa16.31■□□□□ 0.2
ATG4B-225ENST00000494465 COPG1Q9Y678 874 aaKnown RBP16.31■□□□□ 0.2
ATG4B-225ENST00000494465 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.31■□□□□ 0.2
ATG4B-225ENST00000494465 E2F3O00716 465 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 MAGEC1O60732 1142 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 ADSLP30566 484 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-225ENST00000494465 MMP12P39900 470 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 MNAT1P51948 309 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 METAP1P53582 386 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 SLC25A3Q00325 362 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 FCHO2Q0JRZ9 810 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 DNAL1Q4LDG9 190 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 C9orf64Q5T6V5 341 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 DPPA4Q7L190 304 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 ADAMTSL2Q86TH1 951 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 ESAMQ96AP7 390 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 C3orf30Q96M34 536 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 KCNA7Q96RP8 456 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 SEMA4BQ9NPR2 832 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-225ENST00000494465 NUDT4Q9NZJ9 180 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 CD274Q9NZQ7 290 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 NFKBIL1Q9UBC1 381 aaPredicted RBP16.3■□□□□ 0.2
ATG4B-225ENST00000494465 ZNF225Q9UK10 706 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 ADAMTS6Q9UKP5 1117 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 CDH7Q9ULB5 785 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 UNC80Q8N2C7 3258 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 AZIN1O14977 448 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 HLA-EP13747 358 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 DGKAP23743 735 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 ETV3P41162 512 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 RGS4P49798 205 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 RAP1GDS1P52306 607 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 EIF4HQ15056 248 aaKnown RBP16.3■□□□□ 0.2
ATG4B-225ENST00000494465 WASHC2DQ5SRD0 308 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 ANKRD54Q6NXT1 300 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 DTX3LQ8TDB6 740 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 CHFRQ96EP1 664 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 SPATA16Q9BXB7 569 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 PLA2G2FQ9BZM2 168 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 FAM83DQ9H4H8 585 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 ZFP14Q9HCL3 533 aa16.3■□□□□ 0.2
ATG4B-225ENST00000494465 SPINT1O43278 529 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 SNX2O60749 519 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 TM7SF2O76062 418 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 PRDX3P30048 256 aaKnown RBP16.29■□□□□ 0.2
ATG4B-225ENST00000494465 OPRD1P41143 372 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 HNRNPA1L2Q32P51 320 aaKnown RBP16.29■□□□□ 0.2
ATG4B-225ENST00000494465 HENMT1Q5T8I9 393 aaKnown RBP16.29■□□□□ 0.2
ATG4B-225ENST00000494465 LARP4Q71RC2 724 aaKnown RBP eCLIP16.29■□□□□ 0.2
ATG4B-225ENST00000494465 TECPR1Q7Z6L1 1165 aa16.29■□□□□ 0.2
ATG4B-225ENST00000494465 DLG3Q92796 817 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms