RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 GP1BAP07359 652 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 ARNTP27540 789 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 RPL21P46778 160 aaKnown RBP13.33□□□□□ -0.28
COL1A1-208ENST00000494334 MAZP56270 477 aaKnown RBP13.33□□□□□ -0.28
COL1A1-208ENST00000494334 DHX9Q08211 1270 aaKnown RBP13.33□□□□□ -0.28
COL1A1-208ENST00000494334 TUBB2AQ13885 445 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 SEMA3AQ14563 771 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 ITIH4Q14624 930 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 ANKRD20A4Q4UJ75 823 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 BCL7AQ4VC05 210 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 MSS51Q4VC12 460 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 C14orf28Q4W4Y0 310 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 PERM1Q5SV97 790 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 DHRS13Q6UX07 377 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 CERS6Q6ZMG9 384 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 EFL1Q7Z2Z2 1120 aaKnown RBP13.33□□□□□ -0.28
COL1A1-208ENST00000494334 TMEM135Q86UB9 458 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 AMZ2Q86W34 360 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 ARL14Q8N4G2 192 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 IFI44Q8TCB0 444 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.33□□□□□ -0.28
COL1A1-208ENST00000494334 LINC00615Q96LM1 132 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-208ENST00000494334 PWWP2AQ96N64 755 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 FCRL3Q96P31 734 aaPredicted RBP13.33□□□□□ -0.28
COL1A1-208ENST00000494334 TUBB2BQ9BVA1 445 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 PRDM8Q9NQV8 689 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 SAMD15Q9P1V8 674 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 PRSS21Q9Y6M0 314 aa13.33□□□□□ -0.28
COL1A1-208ENST00000494334 ZNF106Q9H2Y7 1883 aaKnown RBP13.33□□□□□ -0.28
COL1A1-208ENST00000494334 SPEGQ15772 3267 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 TRBV23OR9-2A0A075B6M9 112 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 ZCWPW2A0A1B0GU75 182 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 CD3EAPO15446 510 aaKnown RBP13.32□□□□□ -0.28
COL1A1-208ENST00000494334 KCNJ13O60928 360 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 BANF1O75531 89 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 TOP3BO95985 862 aaKnown RBP13.32□□□□□ -0.28
COL1A1-208ENST00000494334 CDK4P11802 303 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 PMLP29590 882 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 NSG1P42857 185 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 ARCN1P48444 511 aaKnown RBP13.32□□□□□ -0.28
COL1A1-208ENST00000494334 PRLHRP49683 370 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 DMPKQ09013 629 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 FOXC1Q12948 553 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 LYPLAL1Q5VWZ2 237 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 DUPD1Q68J44 220 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 KIAA0930Q6ICG6 404 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-208ENST00000494334 IYDQ6PHW0 289 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 RAB44Q7Z6P3 723 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-208ENST00000494334 LDB1Q86U70 411 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-208ENST00000494334 CHCHD4Q8N4Q1 142 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 CLDN19Q8N6F1 224 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 OR6C4Q8NGE1 309 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 NAT6Q93015 286 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 ZNF669Q96BR6 464 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-208ENST00000494334 TTC1Q99614 292 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 DPH5Q9H2P9 285 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 OSGEPL1Q9H4B0 414 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 CATSPERZQ9NTU4 200 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 MARCH4Q9P2E8 410 aaPredicted RBP13.32□□□□□ -0.28
COL1A1-208ENST00000494334 LRIT1Q9P2V4 623 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 RABGEF1Q9UJ41 708 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 ANAPC5Q9UJX4 755 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 WASF3Q9UPY6 502 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 MAD1L1Q9Y6D9 718 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 RPS6KL1Q9Y6S9 549 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 RNF215Q9Y6U7 377 aa13.32□□□□□ -0.28
COL1A1-208ENST00000494334 PLXNB3Q9ULL4 1909 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 MGAT4DA6NG13 374 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 GOLGA8KD6RF30 607 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 GOLGA8TH3BQL2 631 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 NUDT21O43809 227 aaKnown RBP13.31□□□□□ -0.28
COL1A1-208ENST00000494334 HYAL3O43820 417 aaPredicted RBP13.31□□□□□ -0.28
COL1A1-208ENST00000494334 OR1I1O60431 355 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 USP1O94782 785 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 AP2A2O94973 939 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 F3P13726 295 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 GLB1P16278 677 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 VCLP18206 1134 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 PAMP19021 973 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 IDSP22304 550 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 RPL10P27635 214 aaKnown RBP13.31□□□□□ -0.28
COL1A1-208ENST00000494334 PBLDP30039 288 aaPredicted RBP13.31□□□□□ -0.28
COL1A1-208ENST00000494334 E2F1Q01094 437 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 NFE2L1Q14494 772 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 BBS9Q3SYG4 887 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 DNAJC21Q5F1R6 531 aaKnown RBP13.31□□□□□ -0.28
COL1A1-208ENST00000494334 XKR5Q6UX68 686 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 PACS1Q6VY07 963 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 FAM83HQ6ZRV2 1179 aaPredicted RBP13.31□□□□□ -0.28
COL1A1-208ENST00000494334 IGDCC3Q8IVU1 814 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 PDIK1LQ8N165 341 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 SFRP1Q8N474 314 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 BBOF1Q8ND07 529 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 OR2L2Q8NH16 312 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 SLC37A2Q8TED4 501 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 CCDC74AQ96AQ1 378 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 STAMBPL1Q96FJ0 436 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 EBNA1BP2Q99848 306 aaKnown RBP13.31□□□□□ -0.28
COL1A1-208ENST00000494334 CCDC3Q9BQI4 270 aa13.31□□□□□ -0.28
COL1A1-208ENST00000494334 IL1RAPL1Q9NZN1 696 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms