RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 A0A087WZ62 844 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 LOC100653049A0A140TA62 436 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 SYCE3A1L190 88 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 XKRY2A2RUG3 117 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 SLC9B1P1A6NJY1 282 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 OR6C76A6NM76 312 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 A6NNC1 897 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 VGLL3A8MV65 326 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 EFCAB8A8MWE9 144 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 KPNA7A9QM74 516 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 STX16-NPEPL1H3BU86 382 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 RHODO00212 210 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 CXCL11O14625 94 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 STX16O14662 325 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 TNPO2O14787 897 aaKnown RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 CASC3O15234 703 aaKnown RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 BCAT2O15382 392 aaPredicted RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 KLK10O43240 276 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 DNPH1O43598 174 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 VEGFDO43915 354 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 GMFGO60234 142 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 CYTIPO60759 359 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 KRT34O76011 436 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 LETM1O95202 739 aaPredicted RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 C22orf31O95567 290 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 NFATC1O95644 943 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 NTSR2O95665 410 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 GLUD1P00367 558 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 NPPAP01160 153 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 FYNP06241 537 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 ABCB1P08183 1280 aaPredicted RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 SPARCP09486 303 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 FAM86B2P0C5J1 330 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 ARP10275 920 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 SRCP12931 536 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 IL1R1P14778 569 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 GALP22466 123 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 PTPN3P26045 913 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 ALDH1B1P30837 517 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 SLC8A1P32418 973 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 PBX1P40424 430 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 MDH1P40925 334 aaKnown RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 GLUD2P49448 558 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 LIG4P49917 911 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 KHKP50053 298 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 NPY4RP50391 375 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 CDK7P50613 346 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 BMXP51813 675 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 ALDH18A1P54886 795 aaKnown RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 VCPP55072 806 aaKnown RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 HADHBP55084 474 aaKnown RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 KIAA1024LP59773 190 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 RPL7AP62424 266 aaKnown RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 TRA2BP62995 288 aaKnown RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 PRAMEP78395 509 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 ARHGAP8P85298 464 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 PRKCEQ02156 737 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 SPAG1Q07617 926 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 GPS1Q13098 491 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 MTAPQ13126 283 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 GPM6BQ13491 265 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 TRA2AQ13595 282 aaKnown RBP eCLIP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 CBFBQ13951 182 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 BAATQ14032 418 aaPredicted RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 GAMTQ14353 236 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 GALNT3Q14435 633 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 IRF3Q14653 427 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 PCLAFQ15004 111 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 NFIL3Q16649 462 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 HFEQ30201 348 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 TRIM60Q495X7 471 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 CFAP221Q4G0U5 840 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 AARDQ4LEZ3 155 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 ANKRD20A4Q4UJ75 823 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 LRRC23Q53EV4 343 aaPredicted RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 ANKRD20A8PQ5CZ79 823 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 Q5PR19 223 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 ANKRD20A2Q5SQ80 823 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 TTC22Q5TAA0 569 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 RIPPLY2Q5TAB7 128 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 ANKRD20A1Q5TYW2 823 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 ANKRD20A3Q5VUR7 823 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 OTUD1Q5VV17 481 aaPredicted RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 TTC19Q6DKK2 380 aaPredicted RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 HEPHL1Q6MZM0 1159 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 HMBOX1Q6NT76 420 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 ZCCHC12Q6PEW1 402 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 KLHL35Q6PF15 583 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 NCEH1Q6PIU2 408 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 SARM1Q6SZW1 724 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 KYAT3Q6YP21 454 aaKnown RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 RBM43Q6ZSC3 357 aaKnown RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 Q6ZTK2 550 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 KIAA0408Q6ZU52 694 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 MARK2Q7KZI7 788 aaKnown RBP2.23□□□□□ -2.05
PTPN12-212ENST00000494248 CYB5R4Q7L1T6 521 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 DSG4Q86SJ6 1040 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 TLK2Q86UE8 772 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 RHPN2Q8IUC4 686 aa2.23□□□□□ -2.05
PTPN12-212ENST00000494248 UNC5CLQ8IV45 518 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms