RNA–Protein interactions for RNA: ENST00000494054.1

UFD1-210, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-210ENST00000494054 EXD3Q8N9H8 876 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 GDAP1Q8TB36 358 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 DTX3LQ8TDB6 740 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 NKD1Q969G9 470 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 CTRCQ99895 268 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 APOL2Q9BQE5 337 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 FICDQ9BVA6 458 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 DDA1Q9BW61 102 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.6□□□□□ -0.87
UFD1-210ENST00000494054 SPRY4Q9C004 299 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 GBA3Q9H227 469 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 STN1Q9H668 368 aaKnown RBP9.6□□□□□ -0.87
UFD1-210ENST00000494054 HACD3Q9P035 362 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 TRIM10Q9UDY6 481 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 EFR3BQ9Y2G0 817 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 WDR37Q9Y2I8 494 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 KCTD3Q9Y597 815 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 PCDHB11Q9Y5F2 797 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 PCDHGA4Q9Y5G9 962 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 GCN1Q92616 2671 aaKnown RBP9.6□□□□□ -0.87
UFD1-210ENST00000494054 ZNF462Q96JM2 2506 aa9.6□□□□□ -0.87
UFD1-210ENST00000494054 MACROD2A1Z1Q3 448 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 CCDC66A2RUB6 948 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 LILRA5A6NI73 299 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 STMND1H3BQB6 276 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 STX7O15400 261 aaKnown RBP9.59□□□□□ -0.87
UFD1-210ENST00000494054 KCNN4O15554 427 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 POP7O75817 140 aaKnown RBP9.59□□□□□ -0.87
UFD1-210ENST00000494054 VIPP01282 170 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 IDSP22304 550 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 PSMB4P28070 264 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 TNNT3P45378 269 aaPredicted RBP9.59□□□□□ -0.87
UFD1-210ENST00000494054 GEMP55040 296 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 MC2RQ01718 297 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 MSLNQ13421 630 aaPredicted RBP9.59□□□□□ -0.87
UFD1-210ENST00000494054 CLCA4Q14CN2 919 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 LINC00303Q3SY05 128 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 GPRC6AQ5T6X5 926 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 AGAP9Q5VTM2 703 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 ZDHHC20Q5W0Z9 365 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 ITPRIPL1Q6GPH6 555 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 DARS2Q6PI48 645 aaKnown RBP9.59□□□□□ -0.87
UFD1-210ENST00000494054 WASH2PQ6VEQ5 465 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 FAM83HQ6ZRV2 1179 aaPredicted RBP9.59□□□□□ -0.87
UFD1-210ENST00000494054 MICALCLQ6ZW33 695 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 TRAPPC5Q8IUR0 188 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 CDKL3Q8IVW4 592 aaPredicted RBP9.59□□□□□ -0.87
UFD1-210ENST00000494054 CCDC110Q8TBZ0 833 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 ZNF398Q8TD17 642 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 BRSK1Q8TDC3 778 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 NAT14Q8WUY8 206 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 EXTL1Q92935 676 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 RTP4Q96DX8 246 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 SGF29Q96ES7 293 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 UCK1Q9HA47 277 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 APMAPQ9HDC9 416 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 WASH6PQ9NQA3 447 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 ARL5AQ9Y689 179 aa9.59□□□□□ -0.87
UFD1-210ENST00000494054 HELZ2Q9BYK8 2649 aaKnown RBP9.59□□□□□ -0.87
UFD1-210ENST00000494054 PIEZO2Q9H5I5 2752 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 MN1Q10571 1320 aaPredicted RBP9.58□□□□□ -0.88
UFD1-210ENST00000494054 OR2AG2A6NM03 316 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 ANXA9O76027 345 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 UBXN7O94888 489 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 IPO7O95373 1038 aaKnown RBP9.58□□□□□ -0.88
UFD1-210ENST00000494054 C9P02748 559 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 LEPRP48357 1165 aaKnown RBP9.58□□□□□ -0.88
UFD1-210ENST00000494054 XIAPP98170 497 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 GTF2H3Q13889 308 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 GPR18Q14330 331 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 SPARCL1Q14515 664 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 DCAF12Q5T6F0 453 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 DENND5AQ6IQ26 1287 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 TMEM220Q6QAJ8 160 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 XKR5Q6UX68 686 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 TIPARPQ7Z3E1 657 aaKnown RBP9.58□□□□□ -0.88
UFD1-210ENST00000494054 AMZ2Q86W34 360 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 TRIM48Q8IWZ4 208 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 BEND7Q8N7W2 519 aaPredicted RBP9.58□□□□□ -0.88
UFD1-210ENST00000494054 AVL9Q8NBF6 648 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 CCDC112Q8NEF3 446 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 DDHD1Q8NEL9 900 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 OR4K2Q8NGD2 314 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 RSC1A1Q92681 617 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 RNF31Q96EP0 1072 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 CALR3Q96L12 384 aaKnown RBP9.58□□□□□ -0.88
UFD1-210ENST00000494054 C9orf72Q96LT7 481 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 SPATA13Q96N96 652 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 TTC25Q96NG3 672 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 BAG1Q99933 345 aaPredicted RBP9.58□□□□□ -0.88
UFD1-210ENST00000494054 DESI2Q9BSY9 194 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 FSD1LQ9BXM9 530 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 ASPSCR1Q9BZE9 553 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 EPB41L1Q9H4G0 881 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 SLC40A1Q9NP59 571 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 FBXO8Q9NRD0 319 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 POT1Q9NUX5 634 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.58□□□□□ -0.88
UFD1-210ENST00000494054 FKBPLQ9UIM3 349 aa9.58□□□□□ -0.88
UFD1-210ENST00000494054 PILRAQ9UKJ1 303 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms