RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 TIFAQ96CG3 184 aa11.38□□□□□ -0.59
RFC4-214ENST00000494047 DNAJC1Q96KC8 554 aaKnown RBP11.38□□□□□ -0.59
RFC4-214ENST00000494047 PGLYRP2Q96PD5 576 aa11.38□□□□□ -0.59
RFC4-214ENST00000494047 DOK1Q99704 481 aa11.38□□□□□ -0.59
RFC4-214ENST00000494047 TTLL2Q9BWV7 592 aa11.38□□□□□ -0.59
RFC4-214ENST00000494047 CWH43Q9H720 699 aa11.38□□□□□ -0.59
RFC4-214ENST00000494047 ASIC5Q9NY37 505 aa11.38□□□□□ -0.59
RFC4-214ENST00000494047 CXXC1Q9P0U4 656 aaPredicted RBP11.38□□□□□ -0.59
RFC4-214ENST00000494047 AP1M2Q9Y6Q5 423 aa11.38□□□□□ -0.59
RFC4-214ENST00000494047 UBA6A0AVT1 1052 aaPredicted RBP11.37□□□□□ -0.59
RFC4-214ENST00000494047 E5RI56 91 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 FXYD1O00168 92 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 AURKAO14965 403 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 CLOCKO15516 846 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 KDELR3O43731 214 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 NBNO60934 754 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 TIPRLO75663 272 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 ALBP02768 609 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 ZDHHC11BP0C7U3 371 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 RAP2AP10114 183 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 HAPLN1P10915 354 aaPredicted RBP11.37□□□□□ -0.59
RFC4-214ENST00000494047 ETS2P15036 469 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 CAPN3P20807 821 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 RPS3P23396 243 aaKnown RBP eCLIP11.37□□□□□ -0.593e-9■■□□□ 11.4
RFC4-214ENST00000494047 JAK1P23458 1154 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 ARSDP51689 593 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 PTPN5P54829 565 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 PLOD1Q02809 727 aaPredicted RBP11.37□□□□□ -0.59
RFC4-214ENST00000494047 GNA12Q03113 381 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 GPR17Q13304 367 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 IL18R1Q13478 541 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 SPIDRQ14159 915 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 CTXN3Q4LDR2 81 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 CCNYL2Q5T2Q4 361 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 TRAF7Q6Q0C0 670 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 CYP2R1Q6VVX0 501 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 CYHR1Q6ZMK1 362 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 FRA10AC1Q70Z53 315 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 ZFAND4Q86XD8 727 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 GPSM1Q86YR5 675 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 MYO1HQ8N1T3 1032 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 CBR4Q8N4T8 237 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 AURKBQ96GD4 344 aaPredicted RBP11.37□□□□□ -0.59
RFC4-214ENST00000494047 MRPL9Q9BYD2 267 aaKnown RBP11.37□□□□□ -0.59
RFC4-214ENST00000494047 PBX4Q9BYU1 374 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 NACA2Q9H009 215 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 SEMA6AQ9H2E6 1030 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 SCUBE2Q9NQ36 999 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 TBC1D23Q9NUY8 699 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 DUS2Q9NX74 493 aaKnown RBP11.37□□□□□ -0.59
RFC4-214ENST00000494047 MAP10Q9P2G4 905 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 KLHL42Q9P2K6 505 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 DNMT3LQ9UJW3 386 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 PCTPQ9UKL6 214 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 FAF1Q9UNN5 650 aaPredicted RBP11.37□□□□□ -0.59
RFC4-214ENST00000494047 CRYL1Q9Y2S2 319 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 RNF11Q9Y3C5 154 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 ST14Q9Y5Y6 855 aa11.37□□□□□ -0.59
RFC4-214ENST00000494047 GREB1Q4ZG55 1949 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 A0A1B0GVM2 712 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 SLC12A8A0AV02 714 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 SAC3D1A6NKF1 404 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 RAD51BO15315 384 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 ACSL4O60488 711 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 CBFA2T3O75081 653 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 ECI2O75521 394 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 OR6B1O95007 311 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 CSPG5O95196 566 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 SLC4A1P02730 911 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 DCKP27707 260 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 AKT1P31749 480 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 GSK3BP49841 420 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 HLCSP50747 726 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 TMBIM6P55061 237 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 MAXP61244 160 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 FAM189BP81408 668 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 ZNF33BQ06732 778 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 GRSF1Q12849 480 aaKnown RBP eCLIP11.36□□□□□ -0.59
RFC4-214ENST00000494047 MRPL58Q14197 206 aaKnown RBP11.36□□□□□ -0.59
RFC4-214ENST00000494047 GPNMBQ14956 572 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 OR4D1Q15615 310 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 VPS26BQ4G0F5 336 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 ALFQ53S48 1182 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 INO80DQ53TQ3 878 aaPredicted RBP11.36□□□□□ -0.59
RFC4-214ENST00000494047 ZNF789Q5FWF6 425 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 RAP1GAP2Q684P5 730 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 HMBOX1Q6NT76 420 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 ZNF549Q6P9A3 640 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 TMEM207Q6UWW9 146 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 MSANTD1Q6ZTZ1 278 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 ANKS3Q6ZW76 656 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 Q7L0L9 218 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 RETREG3Q86VR2 466 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 ZNF786Q8N393 782 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 RYBPQ8N488 228 aaPredicted RBP11.36□□□□□ -0.59
RFC4-214ENST00000494047 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.36□□□□□ -0.59
RFC4-214ENST00000494047 FAM156AQ8NDB6 213 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 FUBP1Q96AE4 644 aaKnown RBP11.36□□□□□ -0.59
RFC4-214ENST00000494047 VPS33AQ96AX1 596 aa11.36□□□□□ -0.59
RFC4-214ENST00000494047 RMDN1Q96DB5 314 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms