RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 GLIS1Q8NBF1 620 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 NUDT22Q9BRQ3 303 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 SEMA6CQ9H3T2 930 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 UCK1Q9HA47 277 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 RAB6BQ9NRW1 208 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 HOMER3Q9NSC5 361 aa22.26■■□□□ 1.15
SNIP1-203ENST00000493916 MROH6A6NGR9 719 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 CDRT15L2A8MXV6 281 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 E7EVH7 732 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 ZSCAN12O43309 604 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 XRCC1P18887 633 aaPredicted RBP22.25■■□□□ 1.15
SNIP1-203ENST00000493916 IDSP22304 550 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 CSF2RBP32927 897 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 PCBP4P57723 403 aaKnown RBP22.25■■□□□ 1.15
SNIP1-203ENST00000493916 SEPT6Q14141 434 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 GPR33Q49SQ1 333 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 NKAIN2Q5VXU1 208 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 TMEM220Q6QAJ8 160 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 C4orf22Q6V702 233 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 USP53Q70EK8 1073 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 CLEC14AQ86T13 490 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 PRUNE1Q86TP1 453 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 AMZ2Q86W34 360 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 NXPE1Q8N323 547 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 FBXO39Q8N4B4 442 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 OR4D9Q8NGE8 314 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 OR52K1Q8NGK4 314 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 OR10G6Q8NH81 332 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 STYXQ8WUJ0 223 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 LDHAL6BQ9BYZ2 381 aaPredicted RBP22.25■■□□□ 1.15
SNIP1-203ENST00000493916 PIH1D1Q9NWS0 290 aaKnown RBP22.25■■□□□ 1.15
SNIP1-203ENST00000493916 SCHIP1Q9P0W5 487 aaPredicted RBP22.25■■□□□ 1.15
SNIP1-203ENST00000493916 CRLS1Q9UJA2 301 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 LOXL2Q9Y4K0 774 aa22.25■■□□□ 1.15
SNIP1-203ENST00000493916 NBEAQ8NFP9 2946 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 KLHL33A6NCF5 533 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 OR2AG2A6NM03 316 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 PDZK1P1A8MUH7 402 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 RRP8O43159 456 aaKnown RBP22.24■■□□□ 1.15
SNIP1-203ENST00000493916 DUX1O43812 170 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 POP7O75817 140 aaKnown RBP22.24■■□□□ 1.15
SNIP1-203ENST00000493916 TNFSF15O95150 251 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 BRAFP15056 766 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 MC4RP32245 332 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 RPL22P35268 128 aaKnown RBP22.24■■□□□ 1.15
SNIP1-203ENST00000493916 LMAN1P49257 510 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 LIMK2P53671 638 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 CFHR1Q03591 330 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 BCL7AQ4VC05 210 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 PHF19Q5T6S3 580 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 FOXR1Q6PIV2 292 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 ZNF574Q6ZN55 896 aaPredicted RBP22.24■■□□□ 1.15
SNIP1-203ENST00000493916 ZNF761Q86XN6 746 aaPredicted RBP22.24■■□□□ 1.15
SNIP1-203ENST00000493916 RASGEF1CQ8N431 466 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 DNAAF3Q8N9W5 541 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 HEXDCQ8WVB3 486 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 ANP32BQ92688 251 aaKnown RBP22.24■■□□□ 1.15
SNIP1-203ENST00000493916 PDLIM2Q96JY6 352 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 DCBLD2Q96PD2 775 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 EPB41L1Q9H4G0 881 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 SLC30A1Q9Y6M5 507 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 CHD6Q8TD26 2715 aa22.24■■□□□ 1.15
SNIP1-203ENST00000493916 TRBV5-4A0A0C4DH59 114 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 IGHV5-10-1A0A0J9YXX1 117 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 LILRA5A6NI73 299 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 CCL22O00626 93 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 HGSO14964 777 aaPredicted RBP22.23■■□□□ 1.15
SNIP1-203ENST00000493916 GAS8O95995 478 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 ZSCAN5DPP0CG00 497 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 RALBP11234 206 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 TRA2AQ13595 282 aaKnown RBP eCLIP22.23■■□□□ 1.15
SNIP1-203ENST00000493916 LAMB3Q13751 1172 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 SEPT7Q16181 437 aaKnown RBP22.23■■□□□ 1.15
SNIP1-203ENST00000493916 FNBP1LQ5T0N5 605 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 WDR74Q6RFH5 385 aaPredicted RBP22.23■■□□□ 1.15
SNIP1-203ENST00000493916 PPP1R21Q6ZMI0 780 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 LRRC69Q6ZNQ3 347 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 PRELID2Q8N945 189 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 ZNF248Q8NDW4 579 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 AHCYL2Q96HN2 611 aaKnown RBP22.23■■□□□ 1.15
SNIP1-203ENST00000493916 PBKQ96KB5 322 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 COPS8Q99627 209 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 CMKLR1Q99788 373 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 CASS4Q9NQ75 786 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 EIF2B3Q9NR50 452 aaKnown RBP22.23■■□□□ 1.15
SNIP1-203ENST00000493916 POT1Q9NUX5 634 aa22.23■■□□□ 1.15
SNIP1-203ENST00000493916 ZNF624Q9P2J8 865 aaPredicted RBP22.23■■□□□ 1.15
SNIP1-203ENST00000493916 TTC7AQ9ULT0 858 aaPredicted RBP22.23■■□□□ 1.15
SNIP1-203ENST00000493916 IGLV3-16A0A075B6K0 115 aa22.22■■□□□ 1.15
SNIP1-203ENST00000493916 APRTP07741 180 aa22.22■■□□□ 1.15
SNIP1-203ENST00000493916 THRAP10827 490 aa22.22■■□□□ 1.15
SNIP1-203ENST00000493916 HOXB3P14651 431 aaPredicted RBP22.22■■□□□ 1.15
SNIP1-203ENST00000493916 RPL10P27635 214 aaKnown RBP22.22■■□□□ 1.15
SNIP1-203ENST00000493916 SLC19A1P41440 591 aa22.22■■□□□ 1.15
SNIP1-203ENST00000493916 TMEM71Q6P5X7 295 aa22.22■■□□□ 1.15
SNIP1-203ENST00000493916 DET1Q7L5Y6 550 aa22.22■■□□□ 1.15
SNIP1-203ENST00000493916 GSTA5Q7RTV2 222 aa22.22■■□□□ 1.15
SNIP1-203ENST00000493916 TRIM48Q8IWZ4 208 aa22.22■■□□□ 1.15
SNIP1-203ENST00000493916 RBM12BQ8IXT5 1001 aaKnown RBP22.22■■□□□ 1.15
SNIP1-203ENST00000493916 SGF29Q96ES7 293 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms