RNA–Protein interactions for RNA: ENST00000493387.5

LSM2-214, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-214ENST00000493387 ARFGAP3Q9NP61 516 aa11.4□□□□□ -0.58
LSM2-214ENST00000493387 FBXO6Q9NRD1 293 aaPredicted RBP11.4□□□□□ -0.58
LSM2-214ENST00000493387 SMYD2Q9NRG4 433 aa11.4□□□□□ -0.58
LSM2-214ENST00000493387 TRNAU1APQ9NX07 287 aaKnown RBP11.4□□□□□ -0.58
LSM2-214ENST00000493387 NCDNQ9UBB6 729 aa11.4□□□□□ -0.58
LSM2-214ENST00000493387 ZNHIT2Q9UHR6 403 aa11.4□□□□□ -0.58
LSM2-214ENST00000493387 SUFUQ9UMX1 484 aa11.4□□□□□ -0.58
LSM2-214ENST00000493387 SSUH2Q9Y2M2 353 aa11.4□□□□□ -0.58
LSM2-214ENST00000493387 CRYL1Q9Y2S2 319 aa11.4□□□□□ -0.58
LSM2-214ENST00000493387 PI4KAP42356 2102 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 C17orf113A0A1B0GUU1 675 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 EXOC1LA0A1B0GW35 172 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 CXorf49A8MYA2 514 aaPredicted RBP11.39□□□□□ -0.59
LSM2-214ENST00000493387 ARHGAP33O14559 1287 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 OR1I1O60431 355 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 HAUS5O94927 633 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 CER1O95813 267 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 AHSGP02765 367 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 NUDT17P0C025 328 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 ZNF806P0C7X5 589 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 CTSEP14091 401 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 PKMP14618 531 aaKnown RBP11.39□□□□□ -0.59
LSM2-214ENST00000493387 NME1P15531 152 aaKnown RBP11.39□□□□□ -0.59
LSM2-214ENST00000493387 JUNDP17535 347 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 FMO4P31512 558 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 MSH2P43246 934 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 GNPDA1P46926 289 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 POLD2P49005 469 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 PRLHRP49683 370 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 SERPINB9P50453 376 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 PLOD1Q02809 727 aaPredicted RBP11.39□□□□□ -0.59
LSM2-214ENST00000493387 GRIK2Q13002 908 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 ZNF423Q2M1K9 1284 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 TPRG1LQ5T0D9 272 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 UGT3A1Q6NUS8 523 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 LAYNQ6UX15 382 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 DET1Q7L5Y6 550 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 ZC3HC1Q86WB0 502 aaKnown RBP11.39□□□□□ -0.59
LSM2-214ENST00000493387 PHACTR4Q8IZ21 702 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 FSTL5Q8N475 847 aaPredicted RBP11.39□□□□□ -0.59
LSM2-214ENST00000493387 SLC44A1Q8WWI5 657 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 TSACCQ96A04 125 aaPredicted RBP11.39□□□□□ -0.59
LSM2-214ENST00000493387 SGF29Q96ES7 293 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 ELF4Q99607 663 aaPredicted RBP11.39□□□□□ -0.59
LSM2-214ENST00000493387 TIMM29Q9BSF4 260 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 CCM2Q9BSQ5 444 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 EPB41L4BQ9H329 900 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 DNAJC28Q9NX36 388 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 KLHL42Q9P2K6 505 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 SPASTQ9UBP0 616 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 SLC24A2Q9UI40 661 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 ZNF180Q9UJW8 692 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 GPSM3Q9Y4H4 160 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 SNX11Q9Y5W9 270 aa11.39□□□□□ -0.59
LSM2-214ENST00000493387 TNRC6BQ9UPQ9 1833 aaKnown RBP11.39□□□□□ -0.59
LSM2-214ENST00000493387 CACNA1EQ15878 2313 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 KNL1Q8NG31 2342 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 MGAT4DA6NG13 374 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 OR2AG2A6NM03 316 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 TCEA3O75764 348 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 POP7O75817 140 aaKnown RBP11.38□□□□□ -0.59
LSM2-214ENST00000493387 CD9P21926 228 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 CNTFP26441 200 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 GABRB3P28472 473 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 SKIV2L2P42285 1042 aaKnown RBP11.38□□□□□ -0.59
LSM2-214ENST00000493387 CLCNKAP51800 687 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 CTSCP53634 463 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 ATXN3P54252 364 aaPredicted RBP11.38□□□□□ -0.59
LSM2-214ENST00000493387 IRX4P78413 519 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 IFFO1Q0D2I5 559 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 ILF3Q12906 894 aaKnown RBP eCLIP11.38□□□□□ -0.592e-7■■□□□ 14.4
LSM2-214ENST00000493387 ELOCQ15369 112 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 UAP1Q16222 522 aaPredicted RBP11.38□□□□□ -0.59
LSM2-214ENST00000493387 BEND6Q5SZJ8 279 aaPredicted RBP11.38□□□□□ -0.59
LSM2-214ENST00000493387 FAM45BPQ6NSW5 357 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 CNSTQ6PJW8 725 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 CRTC3Q6UUV7 619 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 MICALCLQ6ZW33 695 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 RD3Q7Z3Z2 195 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 CROCCP2Q86T23 111 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 AMZ2Q86W34 360 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 CLDN19Q8N6F1 224 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 UHMK1Q8TAS1 419 aaKnown RBP11.38□□□□□ -0.59
LSM2-214ENST00000493387 FAM45AQ8TCE6 357 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 KCNJ9Q92806 393 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 TSPAN17Q96FV3 270 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 PDXPQ96GD0 296 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 VPS39Q96JC1 886 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 BIRC8Q96P09 236 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 RBBP8Q99708 897 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 AARSD1Q9BTE6 412 aaKnown RBP11.38□□□□□ -0.59
LSM2-214ENST00000493387 GSDMCQ9BYG8 508 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 ROPN1BQ9BZX4 212 aaPredicted RBP11.38□□□□□ -0.59
LSM2-214ENST00000493387 ROPN1Q9HAT0 212 aaPredicted RBP11.38□□□□□ -0.59
LSM2-214ENST00000493387 MRPL40Q9NQ50 206 aaKnown RBP11.38□□□□□ -0.59
LSM2-214ENST00000493387 FAM86C1Q9NVL1 165 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 TAS2R13Q9NYV9 303 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 APOBEC3BQ9UH17 382 aaKnown RBP11.38□□□□□ -0.59
LSM2-214ENST00000493387 VWA7Q9Y334 891 aa11.38□□□□□ -0.59
LSM2-214ENST00000493387 PSAT1Q9Y617 370 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms