RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 PDE1BQ01064 536 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 DMPKQ09013 629 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 SLC1A5Q15758 541 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 ZNF648Q5T619 568 aaPredicted RBP12.25□□□□□ -0.45
COL6A1-205ENST00000492851 CCDC181Q5TID7 509 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 ITPRIPL1Q6GPH6 555 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 C11orf63Q6NUN7 778 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 KDELC1Q6UW63 502 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 ATG14Q6ZNE5 492 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 GLT6D1Q7Z4J2 308 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 BPHLQ86WA6 291 aaPredicted RBP12.25□□□□□ -0.45
COL6A1-205ENST00000492851 TRAPPC5Q8IUR0 188 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 ZNF547Q8IVP9 402 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 ZNF567Q8N184 647 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 ESX1Q8N693 406 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 ZFPM2Q8WW38 1151 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 HAUS1Q96CS2 278 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 MRGPRX2Q96LB1 330 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 SLC25A18Q9H1K4 315 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 BPIFA1Q9NP55 256 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 IL17CQ9P0M4 197 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 ZNF624Q9P2J8 865 aaPredicted RBP12.25□□□□□ -0.45
COL6A1-205ENST00000492851 EPHA6Q9UF33 1036 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 KLHL3Q9UH77 587 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 SPO11Q9Y5K1 396 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 ATMQ13315 3056 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 KIF26BQ2KJY2 2108 aa12.25□□□□□ -0.45
COL6A1-205ENST00000492851 C5orf60A6NFR6 353 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 PRR19A6NJB7 356 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 C2orf81A6NN90 581 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 APOC4-APOC2K7ER74 178 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 STX7O15400 261 aaKnown RBP12.24□□□□□ -0.45
COL6A1-205ENST00000492851 MTX2O75431 263 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 POP7O75817 140 aaKnown RBP12.24□□□□□ -0.45
COL6A1-205ENST00000492851 RASSF9O75901 435 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 STK10O94804 968 aaKnown RBP12.24□□□□□ -0.45
COL6A1-205ENST00000492851 APOC2P02655 101 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 MT-ND3P03897 115 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 FAM87AP0C7U9 286 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 PECAM1P16284 738 aaPredicted RBP12.24□□□□□ -0.45
COL6A1-205ENST00000492851 TYRP1P17643 537 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 ITGB6P18564 788 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 RPL10P27635 214 aaKnown RBP12.24□□□□□ -0.45
COL6A1-205ENST00000492851 GEMP55040 296 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 CYP4F2P78329 520 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 FOXM1Q08050 763 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 PRPSAP1Q14558 356 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 SEPT7Q16181 437 aaKnown RBP12.24□□□□□ -0.45
COL6A1-205ENST00000492851 LONRF2Q1L5Z9 754 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 BBS12Q6ZW61 710 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 B4GALNT4Q76KP1 1039 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 PRICKLE2Q7Z3G6 844 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 DAAM2Q86T65 1068 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 TTC30BQ8N4P2 665 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 SLC25A41Q8N5S1 370 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 TC2NQ8N9U0 490 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 DDHD1Q8NEL9 900 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 IPMKQ8NFU5 416 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 BLOC1S5Q8TDH9 187 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 PMEPA1Q969W9 287 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 TGM7Q96PF1 710 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 QKIQ96PU8 341 aaKnown RBP eCLIP12.24□□□□□ -0.45
COL6A1-205ENST00000492851 CTRCQ99895 268 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 C19orf43Q9BQ61 176 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 ZNF768Q9H5H4 540 aaKnown RBP12.24□□□□□ -0.45
COL6A1-205ENST00000492851 SCHIP1Q9P0W5 487 aaPredicted RBP12.24□□□□□ -0.45
COL6A1-205ENST00000492851 RSPH14Q9UHP6 348 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 ACSL5Q9ULC5 683 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 SCN8AQ9UQD0 1980 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 PCDHB3Q9Y5E6 796 aa12.24□□□□□ -0.45
COL6A1-205ENST00000492851 HELZ2Q9BYK8 2649 aaKnown RBP12.24□□□□□ -0.45
COL6A1-205ENST00000492851 H7C0C1 242 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 WISP1O95388 367 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 CCNYL3P0C7X3 344 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 RALBP11234 206 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 BRAFP15056 766 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 WT1P19544 449 aaPredicted RBP12.23□□□□□ -0.45
COL6A1-205ENST00000492851 MSH3P20585 1137 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 LPOP22079 712 aaPredicted RBP12.23□□□□□ -0.45
COL6A1-205ENST00000492851 CTNNA2P26232 953 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 CAPZBP47756 277 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 ATP5OP48047 213 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 SEPT6Q14141 434 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 PLA2G4EQ3MJ16 856 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 PRSS42Q7Z5A4 293 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 C11orf96Q7Z7L8 435 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 TMTC1Q8IUR5 882 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 ZNF398Q8TD17 642 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 HEXDCQ8WVB3 486 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 KLHL6Q8WZ60 621 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 UBXN4Q92575 508 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 FCRL4Q96PJ5 515 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 CLMPQ9H6B4 373 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 SMOXQ9NWM0 555 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 SIDT1Q9NXL6 827 aaKnown RBP12.23□□□□□ -0.45
COL6A1-205ENST00000492851 OGFRQ9NZT2 677 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 FEZ2Q9UHY8 353 aaPredicted RBP12.23□□□□□ -0.45
COL6A1-205ENST00000492851 TMPRSS11EQ9UL52 423 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 PCDHA3Q9Y5H8 950 aa12.23□□□□□ -0.45
COL6A1-205ENST00000492851 SLC30A1Q9Y6M5 507 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms