RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 DDAH2O95865 285 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 MT-ND3P03897 115 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 PIRTP0C851 137 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 CES1P23141 567 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 ZNF165P49910 485 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 SLC10A2Q12908 348 aaPredicted RBP12.97□□□□□ -0.33
USF1-206ENST00000491629 GPS2Q13227 327 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 GALNT3Q14435 633 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 PAFAH1B3Q15102 231 aaKnown RBP12.97□□□□□ -0.33
USF1-206ENST00000491629 INSCQ1MX18 579 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 ANKRD20A8PQ5CZ79 823 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 SLC6A19Q695T7 634 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 PPP1R2P3Q6NXS1 205 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 WASH2PQ6VEQ5 465 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 TICAM1Q8IUC6 712 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 LRRC49Q8IUZ0 686 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 TRIM48Q8IWZ4 208 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 THAP4Q8WY91 577 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 FATE1Q969F0 183 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 GLYATL1Q969I3 302 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 TSGA13Q96PP4 275 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 TRIB3Q96RU7 358 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 MAP3K3Q99759 626 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 TIMM29Q9BSF4 260 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 MLPHQ9BV36 600 aaPredicted RBP12.97□□□□□ -0.33
USF1-206ENST00000491629 SPATA16Q9BXB7 569 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 GPR87Q9BY21 358 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 ISCUQ9H1K1 167 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 WASH6PQ9NQA3 447 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 POT1Q9NUX5 634 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 TRIM10Q9UDY6 481 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 TTLL3Q9Y4R7 772 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 ADGRG4Q8IZF6 3080 aa12.97□□□□□ -0.33
USF1-206ENST00000491629 KMOO15229 486 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 KRT86O43790 486 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 LPOP22079 712 aaPredicted RBP12.96□□□□□ -0.33
USF1-206ENST00000491629 CCNCP24863 283 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 CA5AP35218 305 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 CD86P42081 329 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 DPYSL3Q14195 570 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 ZNF569Q5MCW4 686 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 PRAMEF17Q5VTA0 474 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 AGAP9Q5VTM2 703 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 RBM43Q6ZSC3 357 aaKnown RBP12.96□□□□□ -0.33
USF1-206ENST00000491629 TMC3Q7Z5M5 1100 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 SYVN1Q86TM6 617 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 LRRTM4Q86VH4 590 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 CNTD1Q8N815 330 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 SIDT2Q8NBJ9 832 aaKnown RBP12.96□□□□□ -0.33
USF1-206ENST00000491629 FDCSPQ8NFU4 85 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 PRR7Q8TB68 274 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 ZDHHC12Q96GR4 267 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 FCRL4Q96PJ5 515 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 NUP85Q9BW27 656 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 PDE7BQ9NP56 450 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 ACSS2Q9NR19 701 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 NFKBIL1Q9UBC1 381 aaPredicted RBP12.96□□□□□ -0.33
USF1-206ENST00000491629 AMACRQ9UHK6 382 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 RARRES3Q9UL19 164 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 MYO6Q9UM54 1294 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 SHOC2Q9UQ13 582 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 FARSAQ9Y285 508 aaKnown RBP12.96□□□□□ -0.33
USF1-206ENST00000491629 SCINQ9Y6U3 715 aa12.96□□□□□ -0.33
USF1-206ENST00000491629 TACC2O95359 2948 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 DCHS2Q6V1P9 2916 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 F8P00451 2351 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 GPR89AB7ZAQ6 455 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 MTA2O94776 668 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 CBX6O95503 412 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 CAPN1P07384 714 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 CCDC172P0C7W6 258 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 GPR89BP0CG08 455 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 SKILP12757 684 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 POU3F2P20265 443 aaPredicted RBP12.95□□□□□ -0.34
USF1-206ENST00000491629 PRKCIP41743 596 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 ITGA1P56199 1179 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 DCDC1P59894 354 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 GBE1Q04446 702 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 GPR19Q15760 415 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 CHRNA6Q15825 494 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 IFI16Q16666 785 aaKnown RBP12.95□□□□□ -0.34
USF1-206ENST00000491629 TRAM1L1Q8N609 369 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 PQLC3Q8N755 202 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 NIPA2Q8N8Q9 360 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 CCHCR1Q8TD31 782 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 ZNF501Q96CX3 271 aaPredicted RBP12.95□□□□□ -0.34
USF1-206ENST00000491629 ZNF514Q96K75 400 aaPredicted RBP12.95□□□□□ -0.34
USF1-206ENST00000491629 PPM1MQ96MI6 270 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 RANBP9Q96S59 729 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 ZSCAN5AQ9BUG6 496 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 CHST8Q9H2A9 424 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 ZFYVE1Q9HBF4 777 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 FGF21Q9NSA1 209 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 AIPL1Q9NZN9 384 aa12.95□□□□□ -0.34
USF1-206ENST00000491629 SETD2Q9BYW2 2564 aaPredicted RBP12.94□□□□□ -0.34
USF1-206ENST00000491629 AURKAO14965 403 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 CDK14O94921 469 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 JCHAINP01591 159 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 BPIP17213 487 aa12.94□□□□□ -0.34
USF1-206ENST00000491629 FECHP22830 423 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms