RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 MINDY3Q9H8M7 445 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 RMI1Q9H9A7 625 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 ALG13Q9NP73 1137 aaKnown RBP3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 PFDN4Q9NQP4 134 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 C1orf112Q9NSG2 853 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 TBC1D23Q9NUY8 699 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 SLC38A7Q9NVC3 462 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 DDX18Q9NVP1 670 aaKnown RBP3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 OBP2AQ9NY56 170 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 SPATA7Q9P0W8 599 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 MORF4L1Q9UBU8 362 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 HESX1Q9UBX0 185 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 SLC9A2Q9UBY0 812 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 BCAP29Q9UHQ4 241 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 XPO7Q9UIA9 1087 aaKnown RBP3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 GNPTGQ9UJJ9 305 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 TMPRSS11EQ9UL52 423 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 EMCNQ9ULC0 261 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 PCDHGB4Q9UN71 923 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 FAF1Q9UNN5 650 aaPredicted RBP3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 APOBEC2Q9Y235 224 aaKnown RBP3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 DNAJC16Q9Y2G8 782 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 SPEF1Q9Y4P9 236 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 PCDHGB5Q9Y5G0 923 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 STYXL1Q9Y6J8 313 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 GREB1Q4ZG55 1949 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 DOCK6Q96HP0 2047 aa3.46□□□□□ -1.86
CRNKL1-203ENST00000490258 SHROOM3Q8TF72 1996 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 HELZP42694 1942 aaKnown RBP3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 A0A087WXM4 84 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 LCHNA4D1U4 455 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 SLC15A5A6NIM6 579 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 LRRIQ4A6NIV6 560 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 CXorf49A8MYA2 514 aaPredicted RBP3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 ZNF487B1APH4 448 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 TMEM114B3SHH9 223 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 F8W810 466 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 PI4K2BG5E9Z4 385 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 GOLGA8TH3BQL2 631 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 H3BSA7 217 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 SGK1O00141 431 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 TXNDC9O14530 226 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 CYB561D2O14569 222 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 PPEF2O14830 753 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 ZBTB14O43829 449 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 GLRA3O75311 464 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 H2AFYO75367 372 aaKnown RBP3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 TADA2AO75478 443 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 GCATO75600 419 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 KRT38O76015 456 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 ALDH1A2O94788 518 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 ENDOD1O94919 500 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 ESRRBO95718 433 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 IFNB1P01574 187 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 PIGRP01833 764 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 CYP17A1P05093 508 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 KRT7P08729 469 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 CSH1P0DML2 217 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 CSH2P0DML3 217 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 CYP2C9P11712 490 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 COX4I1P13073 169 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 PSMC3P17980 439 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 TPSB2P20231 275 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 TBXAS1P24557 533 aaPredicted RBP3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 ARRB2P32121 409 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 SERPINB6P35237 376 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 STT3AP46977 705 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 CSRP3P50461 194 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 HNRNPFP52597 415 aaKnown RBP3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 THOP1P52888 689 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 PEX3P56589 373 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 NLRP11P59045 1033 aaKnown RBP3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 NAA20P61599 178 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 PHC1P78364 1004 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 NSUN2Q08J23 767 aaKnown RBP eCLIP3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 NIPAL4Q0D2K0 466 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 GRSF1Q12849 480 aaKnown RBP eCLIP3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 ADAM15Q13444 863 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 CUL2Q13617 745 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 CAPSQ13938 189 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 CEACAM7Q14002 265 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 DPYSL3Q14195 570 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 FLOT2Q14254 428 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 LRRC32Q14392 662 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 PCLAFQ15004 111 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 EMC2Q15006 297 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 ACAP1Q15027 740 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 LLGL1Q15334 1064 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 TPSAB1Q15661 275 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 MOGQ16653 247 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 INSCQ1MX18 579 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 LRRC36Q1X8D7 754 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 MGAT5BQ3V5L5 792 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 CCDC153Q494R4 210 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 ATP13A4Q4VNC1 1196 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 FASTKD1Q53R41 847 aaKnown RBP3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 MDH1BQ5I0G3 518 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 GLRA4Q5JXX5 417 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 C6orf52Q5T4I8 152 aa3.45□□□□□ -1.86
CRNKL1-203ENST00000490258 DEPDC1Q5TB30 811 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms