RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 DAAM2Q86T65 1068 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 LRRTM4Q86VH4 590 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 ZNF761Q86XN6 746 aaPredicted RBP9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 DDHD1Q8NEL9 900 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 ACTL9Q8TC94 416 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 SGF29Q96ES7 293 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 MED8Q96G25 268 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 OSBPL8Q9BZF1 889 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 SEMA4CQ9C0C4 833 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 RAB33BQ9H082 229 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 GBA3Q9H227 469 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 SLC40A1Q9NP59 571 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 PLSCR2Q9NRY7 297 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 KLC4Q9NSK0 619 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 OCIAD1Q9NX40 245 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 SIDT1Q9NXL6 827 aaKnown RBP9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 KLHL8Q9P2G9 620 aaPredicted RBP9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 EPHA6Q9UF33 1036 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 PILRAQ9UKJ1 303 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 B3GALT1Q9Y5Z6 326 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 SLC30A1Q9Y6M5 507 aa9.57□□□□□ -0.88
TMEM39A-210ENST00000490099 C5orf60A6NFR6 353 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 EIF4E1BA6NMX2 242 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 STMND1H3BQB6 276 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 TOX3O15405 576 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 SGTAO43765 313 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 UGT1A9O60656 530 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 SNX2O60749 519 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 MTX2O75431 263 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 ANXA9O76027 345 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 AGTP01019 485 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 PYGMP11217 842 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 UGT1A6P19224 532 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 UGT1A1P22309 533 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 UGT1A4P22310 534 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 MPSTP25325 297 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 PSMA3P25788 255 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 UGT1A3P35503 534 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 SPAM1P38567 509 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 VAV2P52735 878 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 RWDD2BP57060 319 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 RAB15P59190 212 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 OTUD4Q01804 1114 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 NFATC2Q13469 925 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 CLCA4Q14CN2 919 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 ANKRD20A2Q5SQ80 823 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 ANKRD20A1Q5TYW2 823 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 ANKRD20A3Q5VUR7 823 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 CRTC3Q6UUV7 619 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 PACS2Q86VP3 889 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 RBM12BQ8IXT5 1001 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 RASGEF1AQ8N9B8 481 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 EXD3Q8N9H8 876 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 CCDC112Q8NEF3 446 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 IPMKQ8NFU5 416 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 NCSTNQ92542 709 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 ART4Q93070 314 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 RTP4Q96DX8 246 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 TEFMQ96QE5 360 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 TBC1D10AQ9BXI6 508 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 SLC12A9Q9BXP2 914 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 STN1Q9H668 368 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 C10orf88Q9H8K7 445 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 UGT1A7Q9HAW7 530 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 UGT1A10Q9HAW8 530 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 UGT1A8Q9HAW9 530 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 BPIFA1Q9NP55 256 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 POT1Q9NUX5 634 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 SLC39A1Q9NY26 324 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 RSPH14Q9UHP6 348 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 WDR37Q9Y2I8 494 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 AAR2Q9Y312 384 aaKnown RBP9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 TMEM184BQ9Y519 407 aaPredicted RBP9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 PCDHB11Q9Y5F2 797 aa9.56□□□□□ -0.88
TMEM39A-210ENST00000490099 GLYATL1P3A0A0U1RQE8 302 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 EFCAB7A8K855 629 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 GOLGA6L6A8MZA4 724 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 POP7O75817 140 aaKnown RBP9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 ZNF189O75820 626 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 TJP3O95049 919 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 RBP3P10745 1247 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 LPOP22079 712 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 IDSP22304 550 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 CTSCP53634 463 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 GEMP55040 296 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 EIF3EP60228 445 aaKnown RBP9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 XIAPP98170 497 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 KLF1Q13351 362 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 PTPRCAPQ14761 206 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 TAF1AQ15573 450 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 TAF1BQ53T94 588 aaPredicted RBP9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 MANEAQ5SRI9 462 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 LDLRAP1Q5SW96 308 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 DCAF12Q5T6F0 453 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 GPRC6AQ5T6X5 926 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 KIAA1614Q5VZ46 1190 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 METRNLQ641Q3 311 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 ANKS6Q68DC2 871 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 KCTD11Q693B1 232 aa9.55□□□□□ -0.88
TMEM39A-210ENST00000490099 ITPRIPL1Q6GPH6 555 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms