RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 ZNF578Q96N58 590 aaPredicted RBP18.81■□□□□ 0.6
EPHB4-207ENST00000489808 SLC46A1Q96NT5 459 aa18.81■□□□□ 0.6
EPHB4-207ENST00000489808 STRADBQ9C0K7 418 aa18.81■□□□□ 0.6
EPHB4-207ENST00000489808 STN1Q9H668 368 aaKnown RBP18.81■□□□□ 0.6
EPHB4-207ENST00000489808 RDH14Q9HBH5 336 aa18.81■□□□□ 0.6
EPHB4-207ENST00000489808 EPB41L5Q9HCM4 733 aa18.81■□□□□ 0.6
EPHB4-207ENST00000489808 KCNK4Q9NYG8 393 aa18.81■□□□□ 0.6
EPHB4-207ENST00000489808 USP24Q9UPU5 2620 aa18.81■□□□□ 0.6
EPHB4-207ENST00000489808 TLX3O43711 291 aaPredicted RBP18.8■□□□□ 0.6
EPHB4-207ENST00000489808 BRAFP15056 766 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 RPL10P27635 214 aaKnown RBP18.8■□□□□ 0.6
EPHB4-207ENST00000489808 SLC19A1P41440 591 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 CDKN1CP49918 316 aaPredicted RBP18.8■□□□□ 0.6
EPHB4-207ENST00000489808 UBE2IP63279 158 aaKnown RBP18.8■□□□□ 0.6
EPHB4-207ENST00000489808 GPLD1P80108 840 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 DMPKQ09013 629 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 LAMB3Q13751 1172 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 TBC1D25Q3MII6 688 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 CCDC38Q502W7 563 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 ZRANB3Q5FWF4 1079 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 FNBP1LQ5T0N5 605 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 AGAP9Q5VTM2 703 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 IGF2-ASQ6U949 168 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 ZNF574Q6ZN55 896 aaPredicted RBP18.8■□□□□ 0.6
EPHB4-207ENST00000489808 DET1Q7L5Y6 550 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 RAB11FIP2Q7L804 512 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 SLITRK4Q8IW52 837 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 NXPE1Q8N323 547 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 FBXO39Q8N4B4 442 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 AVL9Q8NBF6 648 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 COG1Q8WTW3 980 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 MAGOHBQ96A72 148 aaKnown RBP18.8■□□□□ 0.6
EPHB4-207ENST00000489808 DCUN1D1Q96GG9 259 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 OSBPL9Q96SU4 736 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 NAP1L3Q99457 506 aaPredicted RBP18.8■□□□□ 0.6
EPHB4-207ENST00000489808 COPS8Q99627 209 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 NUDT22Q9BRQ3 303 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 AP1M1Q9BXS5 423 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 SEMA6CQ9H3T2 930 aa18.8■□□□□ 0.6
EPHB4-207ENST00000489808 EIF2B3Q9NR50 452 aaKnown RBP18.8■□□□□ 0.6
EPHB4-207ENST00000489808 ZNF624Q9P2J8 865 aaPredicted RBP18.8■□□□□ 0.6
EPHB4-207ENST00000489808 MYLKQ15746 1914 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 TRBV5-4A0A0C4DH59 114 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 HEATR9A2RTY3 570 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 PMS2P1A4D2B8 440 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 PDZK1P1A8MUH7 402 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 SGTAO43765 313 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 RALBP11234 206 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 HOXB3P14651 431 aaPredicted RBP18.79■□□□□ 0.6
EPHB4-207ENST00000489808 ADRA1DP25100 572 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 RBMS1P29558 406 aaKnown RBP18.79■□□□□ 0.6
EPHB4-207ENST00000489808 DRG2P55039 364 aaKnown RBP18.79■□□□□ 0.6
EPHB4-207ENST00000489808 CFHR1Q03591 330 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 EIF3IQ13347 325 aaKnown RBP18.79■□□□□ 0.6
EPHB4-207ENST00000489808 SEPT7Q16181 437 aaKnown RBP18.79■□□□□ 0.6
EPHB4-207ENST00000489808 MAP9Q49MG5 647 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 MICALCLQ6ZW33 695 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 BEND7Q8N7W2 519 aaPredicted RBP18.79■□□□□ 0.6
EPHB4-207ENST00000489808 RANBP9Q96S59 729 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 DPYSL5Q9BPU6 564 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.79■□□□□ 0.6
EPHB4-207ENST00000489808 ASCL3Q9NQ33 180 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 ZDHHC3Q9NYG2 299 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 RIMKLBQ9ULI2 386 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 WDR37Q9Y2I8 494 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 APC2O95996 2303 aa18.79■□□□□ 0.6
EPHB4-207ENST00000489808 CCDC78A2IDD5 438 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 MGAT4DA6NG13 374 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 USP27XA6NNY8 438 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 PLD2O14939 933 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 KRT37O76014 449 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 VIPP01282 170 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 ARSDP51689 593 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 ERVPABLB-1P60509 514 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 BASP1P80723 227 aaKnown RBP18.78■□□□□ 0.6
EPHB4-207ENST00000489808 CACNG1Q06432 222 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 CLCA4Q14CN2 919 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 CYP1B1Q16678 543 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 KCTD19Q17RG1 926 aaPredicted RBP18.78■□□□□ 0.6
EPHB4-207ENST00000489808 BCL7AQ4VC05 210 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 TSTD2Q5T7W7 516 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 METRNLQ641Q3 311 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 TTC27Q6P3X3 843 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 FOXR1Q6PIV2 292 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 FAM83HQ6ZRV2 1179 aaPredicted RBP18.78■□□□□ 0.6
EPHB4-207ENST00000489808 TAS2R42Q7RTR8 314 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 SERPINA9Q86WD7 417 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 OR10G6Q8NH81 332 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 SNIP1Q8TAD8 396 aaKnown RBP18.78■□□□□ 0.6
EPHB4-207ENST00000489808 ACTRT1Q8TDG2 376 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 NAT14Q8WUY8 206 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 CCDC97Q96F63 343 aaPredicted RBP18.78■□□□□ 0.6
EPHB4-207ENST00000489808 AHCYL2Q96HN2 611 aaKnown RBP18.78■□□□□ 0.6
EPHB4-207ENST00000489808 LINC00615Q96LM1 132 aaPredicted RBP18.78■□□□□ 0.6
EPHB4-207ENST00000489808 UCK1Q9HA47 277 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 SMARCAL1Q9NZC9 954 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 SNX12Q9UMY4 172 aa18.78■□□□□ 0.6
EPHB4-207ENST00000489808 URB1O60287 2271 aaKnown RBP18.77■□□□□ 0.6
EPHB4-207ENST00000489808 CELSR3Q9NYQ7 3312 aa18.77■□□□□ 0.6
EPHB4-207ENST00000489808 IGLV3-16A0A075B6K0 115 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms