RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 HORMAD1Q86X24 394 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 C10orf107Q8IVU9 208 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 CPNE9Q8IYJ1 553 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 LRRC34Q8IZ02 419 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TBC1D3Q8IZP1 549 aaPredicted RBP9.89□□□□□ -0.83
USP11-211ENST00000489111 MYO1HQ8N1T3 1032 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 GIMAP7Q8NHV1 300 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 LKAAEAR1Q8TD35 194 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 NAT14Q8WUY8 206 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 SGF29Q96ES7 293 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 GPR78Q96P69 363 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 ZNF317Q96PQ6 595 aaPredicted RBP9.89□□□□□ -0.83
USP11-211ENST00000489111 OSBPL6Q9BZF3 934 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 FOXQ1Q9C009 403 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 KDM4CQ9H3R0 1056 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 ALG9Q9H6U8 611 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 WDR26Q9H7D7 661 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TBC1D17Q9HA65 648 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 FGFR1OP2Q9NVK5 253 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 KLHL42Q9P2K6 505 aa9.89□□□□□ -0.83
USP11-211ENST00000489111 TSR3Q9UJK0 312 aaKnown RBP9.89□□□□□ -0.83
USP11-211ENST00000489111 MTF2Q9Y483 593 aaPredicted RBP9.89□□□□□ -0.83
USP11-211ENST00000489111 CCDC189A1A4V9 331 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 NPEPPSL1A6NEC2 478 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 SYCE1LA8MT33 242 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 G3V2L1 256 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 KLF11O14901 512 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 ZBTB14O43829 449 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 FAM107AO95990 144 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 SOD1P00441 154 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 SERPINE1P05121 402 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 CBSLP0DN79 551 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 CD1DP15813 335 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 DRD4P21917 467 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 ATP5F1P24539 256 aaPredicted RBP9.88□□□□□ -0.83
USP11-211ENST00000489111 GRK2P25098 689 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 CBSP35520 551 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 TPMTP51580 245 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 PRKAA2P54646 552 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 STX3Q13277 289 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 BOP1Q14137 746 aaKnown RBP9.88□□□□□ -0.83
USP11-211ENST00000489111 AGERQ15109 404 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 IRF4Q15306 451 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 WSCD2Q2TBF2 565 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 MAP7D1Q3KQU3 841 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 KHDC1Q4VXA5 237 aaKnown RBP9.88□□□□□ -0.83
USP11-211ENST00000489111 TMEM259Q4ZIN3 620 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 ANO7Q6IWH7 933 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 PNCKQ6P2M8 343 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 FRA10AC1Q70Z53 315 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 RAB44Q7Z6P3 723 aaPredicted RBP9.88□□□□□ -0.83
USP11-211ENST00000489111 ADAMTSL2Q86TH1 951 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 TRIM74Q86UV6 250 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 HEATR4Q86WZ0 1026 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 TRAPPC5Q8IUR0 188 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 ZNF687Q8N1G0 1237 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 RASGEF1AQ8N9B8 481 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 OR2T34Q8NGX1 318 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 BCAS4Q8TDM0 211 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 EEF1AKMT1Q8WVE0 214 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 KLK6Q92876 244 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 EXT2Q93063 718 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 CCDC126Q96EE4 140 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 HIC2Q96JB3 615 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 ZNF514Q96K75 400 aaPredicted RBP9.88□□□□□ -0.83
USP11-211ENST00000489111 SLC30A3Q99726 388 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 C1QTNF2Q9BXJ5 285 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 BTBD1Q9H0C5 482 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 OR2AG1Q9H205 316 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 TFB2MQ9H5Q4 396 aaKnown RBP9.88□□□□□ -0.83
USP11-211ENST00000489111 SGK2Q9HBY8 427 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 GALPQ9UBC7 116 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 RNF112Q9ULX5 631 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 ZFR2Q9UPR6 939 aaKnown RBP9.88□□□□□ -0.83
USP11-211ENST00000489111 C5orf42Q9H799 3197 aa9.88□□□□□ -0.83
USP11-211ENST00000489111 PABPN1LA6NDY0 278 aaKnown RBP9.87□□□□□ -0.83
USP11-211ENST00000489111 OR2AG2A6NM03 316 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 SUPT3HB4E1H0 165 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 EIF3FO00303 357 aaPredicted RBP9.87□□□□□ -0.83
USP11-211ENST00000489111 VEGFDO43915 354 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 TRIM13O60858 407 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 KERAO60938 352 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 SUPT3HO75486 399 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 CDK14O94921 469 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 TSPAN12O95859 305 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 S100BP04271 92 aaPredicted RBP9.87□□□□□ -0.83
USP11-211ENST00000489111 TROVE2P10155 538 aaKnown RBP eCLIP9.87□□□□□ -0.83
USP11-211ENST00000489111 C7P10643 843 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 ENO3P13929 434 aaPredicted RBP9.87□□□□□ -0.83
USP11-211ENST00000489111 TEAD1P28347 426 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 MAT2AP31153 395 aaKnown RBP9.87□□□□□ -0.83
USP11-211ENST00000489111 PRLHRP49683 370 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 PPP2CBP62714 309 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 PPP2CAP67775 309 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 BST1Q10588 318 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 TMEM115Q12893 351 aaPredicted RBP9.87□□□□□ -0.83
USP11-211ENST00000489111 TSNQ15631 228 aaKnown RBP9.87□□□□□ -0.83
USP11-211ENST00000489111 BCL7AQ4VC05 210 aa9.87□□□□□ -0.83
USP11-211ENST00000489111 ZNF648Q5T619 568 aaPredicted RBP9.87□□□□□ -0.83
USP11-211ENST00000489111 LIPMQ5VYY2 423 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms