RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 SPTBN2O15020 2390 aa12.58□□□□□ -0.4
NELFE-209ENST00000488426 E5RI56 91 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 C1QTNF3-AMACRE9PGA6 284 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 DLX3O60479 287 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 KIAA0754O94854 1291 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 CD1DP15813 335 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 GTF2A1P52655 376 aaPredicted RBP12.57□□□□□ -0.4
NELFE-209ENST00000488426 ELP6Q0PNE2 266 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 SF3A3Q12874 501 aaKnown RBP eCLIP12.57□□□□□ -0.45e-7■■■■■ 27.1
NELFE-209ENST00000488426 EGFLAMQ63HQ2 1017 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 PTRHD1Q6GMV3 140 aaKnown RBP12.57□□□□□ -0.4
NELFE-209ENST00000488426 PAQR3Q6TCH7 311 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 RHEBL1Q8TAI7 183 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 TFB2MQ9H5Q4 396 aaKnown RBP12.57□□□□□ -0.4
NELFE-209ENST00000488426 SMOXQ9NWM0 555 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 ZDHHC3Q9NYG2 299 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 SARDHQ9UL12 918 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 EML5Q05BV3 1969 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 IGLV3-16A0A075B6K0 115 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 CCT8L1PA6NM43 557 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 NIPSNAP2O75323 286 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 SNUPNO95149 360 aaKnown RBP12.57□□□□□ -0.4
NELFE-209ENST00000488426 UGT1A6P19224 532 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 UGT1A1P22309 533 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 UGT1A4P22310 534 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 UGT1A3P35503 534 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 UGT1A5P35504 534 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 SERPINB5P36952 375 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 NSG1P42857 185 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 ATP13A5Q4VNC0 1218 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 MACC1Q6ZN28 852 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 PRR23BQ6ZRT6 265 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 TRPM8Q7Z2W7 1104 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 HSD11B1LQ7Z5J1 315 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 ISCA2Q86U28 154 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 SLC22A9Q8IVM8 553 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 NRSN1Q8IZ57 195 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 CD200R1Q8TD46 325 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 ARRDC3Q96B67 414 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 GATA5Q9BWX5 397 aaPredicted RBP12.57□□□□□ -0.4
NELFE-209ENST00000488426 FAM126AQ9BYI3 521 aaPredicted RBP12.57□□□□□ -0.4
NELFE-209ENST00000488426 C20orf27Q9GZN8 174 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 FAM83DQ9H4H8 585 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 PARD6AQ9NPB6 346 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 DYRK4Q9NR20 520 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 DHRS7Q9Y394 339 aa12.57□□□□□ -0.4
NELFE-209ENST00000488426 CKAP5Q14008 2032 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 ITM2AO43736 263 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 ZBTB14O43829 449 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 DCTN3O75935 186 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 EPHX1P07099 455 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 ELFN1P0C7U0 828 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 CHRM3P20309 590 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 CLCN7P51798 805 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 IL2P60568 153 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 NFKB2Q00653 900 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 POM121L1PQ3SYA9 428 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 FAM46CQ5VWP2 391 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 FBXL19Q6PCT2 694 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 NAPRTQ6XQN6 538 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 LIPIQ6XZB0 460 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 CCDC121Q6ZUS5 278 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 PIWIL4Q7Z3Z4 852 aaKnown RBP12.56□□□□□ -0.4
NELFE-209ENST00000488426 LONP2Q86WA8 852 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 TXNDC5Q8NBS9 432 aaKnown RBP12.56□□□□□ -0.4
NELFE-209ENST00000488426 RFWD2Q8NHY2 731 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 PIWIL2Q8TC59 973 aaKnown RBP12.56□□□□□ -0.4
NELFE-209ENST00000488426 KIAA1191Q96A73 305 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 THOC1Q96FV9 657 aaKnown RBP12.56□□□□□ -0.4
NELFE-209ENST00000488426 SORT1Q99523 831 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 COPS8Q99627 209 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 ZSCAN5AQ9BUG6 496 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 UNKQ9C0B0 810 aaKnown RBP12.56□□□□□ -0.4
NELFE-209ENST00000488426 DRC3Q9H069 523 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 KDM4CQ9H3R0 1056 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 ALG9Q9H6U8 611 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 ZNF395Q9H8N7 513 aaPredicted RBP12.56□□□□□ -0.4
NELFE-209ENST00000488426 PRSS16Q9NQE7 514 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 CACNA2D2Q9NY47 1150 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 KCNK4Q9NYG8 393 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 STON1Q9Y6Q2 735 aa12.56□□□□□ -0.4
NELFE-209ENST00000488426 AREL1O15033 823 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 NPHS1O60500 1241 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 IPO13O94829 963 aaKnown RBP12.55□□□□□ -0.4
NELFE-209ENST00000488426 HSPA4LO95757 839 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 ADRB3P13945 408 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 CA5AP35218 305 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 ARFIP2P53365 341 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 CCDC15Q0P6D6 951 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 SIM2Q14190 667 aaPredicted RBP12.55□□□□□ -0.4
NELFE-209ENST00000488426 RCN2Q14257 317 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 ZNF284Q2VY69 593 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 HENMT1Q5T8I9 393 aaKnown RBP12.55□□□□□ -0.4
NELFE-209ENST00000488426 TMEM92Q6UXU6 159 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 RFLNAQ6ZTI6 216 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 Q6ZVL8 140 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 TECPR1Q7Z6L1 1165 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 WDR75Q8IWA0 830 aaKnown RBP12.55□□□□□ -0.4
NELFE-209ENST00000488426 TRAM1L1Q8N609 369 aa12.55□□□□□ -0.4
NELFE-209ENST00000488426 ZNF513Q8N8E2 541 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms