RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 TMEM39BQ9GZU3 492 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 ALDH8A1Q9H2A2 487 aaPredicted RBP3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 RETREG1Q9H6L5 497 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 MAGIXQ9H6Y5 334 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 PADI3Q9ULW8 664 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 PCDHAC2Q9Y5I4 1007 aa3.79□□□□□ -1.8
ECHDC1-217ENST00000488087 CFAP65Q6ZU64 1925 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 PTPRCP08575 1304 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 A0A1W2PQ09 198 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 SYNDIG1LA6NDD5 238 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 VGLL3A8MV65 326 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 MAP2K7O14733 419 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 ANKRD28O15084 1053 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 SMAD9O15198 467 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 DDNO94850 711 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 MYOD1P15172 320 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 NNMTP40261 264 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 USP8P40818 1118 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 EIF2DP41214 584 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 GPR143P51810 404 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 CLDN20P56880 219 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 BRWD1-AS2P59051 145 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 ISL1P61371 349 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 RELQ04864 619 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 ZBTB17Q13105 803 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 IRF3Q14653 427 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 NTRK2Q16620 822 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 TMEM35AQ53FP2 167 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 NSUN5P2Q63ZY6 315 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 RUSC1-AS1Q66K80 236 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 TRNP1Q6NT89 227 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 PAPD4Q6PIY7 484 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 SPSB3Q6PJ21 355 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 KRT77Q7Z794 578 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 TSPAN33Q86UF1 283 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 SATL1Q86VE3 508 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 NRROSQ86YC3 692 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 ARID3BQ8IVW6 561 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 MAP7D3Q8IWC1 876 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 EMC1Q8N766 993 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 ZNF441Q8N8Z8 693 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 OR5R1Q8NH85 324 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 GSDMBQ8TAX9 411 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 THAP6Q8TBB0 222 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 UTP15Q8TED0 518 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 SECTM1Q8WVN6 248 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 PIGTQ969N2 578 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 CDCA5Q96FF9 252 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 IL17FQ96PD4 163 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 UBTD1Q9HAC8 227 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 MORF4L1Q9UBU8 362 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 CHORDC1Q9UHD1 332 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 DBNLQ9UJU6 430 aaKnown RBP3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 RPS6KA6Q9UK32 745 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 POU2F3Q9UKI9 436 aa3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 POLA1P09884 1462 aaPredicted RBP3.78□□□□□ -1.8
ECHDC1-217ENST00000488087 RPGRIP1LQ68CZ1 1315 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 IGHV4OR15-8A0A075B7B6 117 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 LILRA5A6NI73 299 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 SMTNL1A8MU46 457 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 FAM90A26D6RGX4 464 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 ZNF587BE7ETH6 402 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 CTDSP2O14595 271 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 SLC16A5O15375 505 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 PLPP2O43688 288 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 SNRNP70P08621 437 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 GLULP15104 373 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 POLR2CP19387 275 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 UGT1A1P22309 533 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 ACADLP28330 430 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 SLC15A1P46059 708 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 LMAN1P49257 510 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 COG7P83436 770 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 C15orf59Q2T9L4 293 aaPredicted RBP3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 TMCO3Q6UWJ1 677 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 KRT74Q7RTS7 529 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 GALNT5Q7Z7M9 940 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 PRPF39Q86UA1 669 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 RPAINQ86UA6 219 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 KMT5CQ86Y97 462 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 SCYL3Q8IZE3 742 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 C1orf87Q8N0U7 546 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 OR8H2Q8N162 312 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 RASGEF1CQ8N431 466 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 POC5Q8NA72 575 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 BBS10Q8TAM1 723 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 TRPC4APQ8TEL6 797 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 PPP4R1Q8TF05 950 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 SLC44A1Q8WWI5 657 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 SNX21Q969T3 373 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 DNAJC18Q9H819 358 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 DDX31Q9H8H2 851 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 LRRC4Q9HBW1 653 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 PLSCR4Q9NRQ2 329 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 ANKEF1Q9NU02 776 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 GIMAP4Q9NUV9 329 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 MRPL15Q9P015 296 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 RAI14Q9P0K7 980 aa3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 CGNQ9P2M7 1197 aaKnown RBP3.77□□□□□ -1.81
ECHDC1-217ENST00000488087 ZNF580Q9UK33 172 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms