RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 ENTPD2Q9Y5L3 495 aa6.82□□□□□ -1.32
HDAC3-209ENST00000486618 CSNK1G3Q9Y6M4 447 aa6.82□□□□□ -1.32
HDAC3-209ENST00000486618 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.82□□□□□ -1.32
HDAC3-209ENST00000486618 UNC13CQ8NB66 2214 aa6.82□□□□□ -1.32
HDAC3-209ENST00000486618 SPTBN1Q01082 2364 aaKnown RBP6.81□□□□□ -1.32
HDAC3-209ENST00000486618 CCDC187A0A096LP49 1063 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 A0A1W2PPH5 198 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 A0A1W2PQU0 124 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 EME2A4GXA9 379 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-209ENST00000486618 KRT87PA6NCN2 255 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 A6NNZ2 444 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 GOLGA6L19H0YKK7 550 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 TMX2-CTNND1H3BSU7 103 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 L7N2F9 121 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 MTSS1O43312 755 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 SUV39H1O43463 412 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 KLRC4O43908 158 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 DOK2O60496 412 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 SEC22BO75396 215 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 URI1O94763 535 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-209ENST00000486618 NPPAP01160 153 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 APOEP02649 317 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 POLBP06746 335 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 ITGA2BP08514 1039 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 MYF5P13349 255 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 PRLRP16471 622 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 TGM2P21980 687 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 MC4RP32245 332 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 STK19P49842 368 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-209ENST00000486618 RPS6KA3P51812 740 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 CCNHP51946 323 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-209ENST00000486618 PLK1P53350 603 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 HDAC4P56524 1084 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 ARPC4P59998 168 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 GABPB1Q06547 395 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-209ENST00000486618 IQCB1Q15051 598 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 NFIL3Q16649 462 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 CDKN3Q16667 212 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 BBS9Q3SYG4 887 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 CCDC40Q4G0X9 1142 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 AGBL4Q5VU57 503 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 FBXW10Q5XX13 1052 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 KLC3Q6P597 504 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 IYDQ6PHW0 289 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 EFL1Q7Z2Z2 1120 aaKnown RBP6.81□□□□□ -1.32
HDAC3-209ENST00000486618 HORMAD1Q86X24 394 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 SLITRK4Q8IW52 837 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 LGI2Q8N0V4 545 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 OR2C3Q8N628 320 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 GDAP1Q8TB36 358 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-209ENST00000486618 NAT6Q93015 286 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 SGF29Q96ES7 293 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 PRR11Q96HE9 360 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-209ENST00000486618 ARL5BQ96KC2 179 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 FCRL2Q96LA5 508 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-209ENST00000486618 CCDC74BQ96LY2 380 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 IL12RB2Q99665 862 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 MYOCQ99972 504 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 TRIM62Q9BVG3 475 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 FOXP3Q9BZS1 431 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 WNT5BQ9H1J7 359 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 CCDC177Q9NQR7 707 aaPredicted RBP6.81□□□□□ -1.32
HDAC3-209ENST00000486618 DYRK4Q9NR20 520 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 HOMER3Q9NSC5 361 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 SIRT5Q9NXA8 310 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 ANKMY1Q9P2S6 941 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 MTRF1LQ9UGC7 380 aaKnown RBP6.81□□□□□ -1.32
HDAC3-209ENST00000486618 SLC12A6Q9UHW9 1150 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 IPO11Q9UI26 975 aaKnown RBP6.81□□□□□ -1.32
HDAC3-209ENST00000486618 CDC23Q9UJX2 597 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 SARDHQ9UL12 918 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 MTMR6Q9Y217 621 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 SLC5A6Q9Y289 635 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 MED16Q9Y2X0 877 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 HS3ST3A1Q9Y663 406 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 CREBBPQ92793 2442 aa6.81□□□□□ -1.32
HDAC3-209ENST00000486618 A0A087WV62 115 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 LY6G6EA0A0G2JKS1 128 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 A0A1W2PNU3 283 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-209ENST00000486618 F5H5T6 163 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 O00370 1275 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 PRPSAP2O60256 369 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 NEBLO76041 1014 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 PCDH8O95206 1070 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 MOCS2O96007 188 aaPredicted RBP6.8□□□□□ -1.32
HDAC3-209ENST00000486618 CSF2P04141 144 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 HRGP04196 525 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 GP1BBP13224 206 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 VAV1P15498 845 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 NME1P15531 152 aaKnown RBP6.8□□□□□ -1.32
HDAC3-209ENST00000486618 TACR2P21452 398 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 KELP23276 732 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 CNTFP26441 200 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 ME1P48163 572 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 NR2C2P49116 596 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 VPS41P49754 854 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 RGS7P49802 495 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 METAP1P53582 386 aa6.8□□□□□ -1.32
HDAC3-209ENST00000486618 RNASE9P60153 205 aaKnown RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms