RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ARL10Q8N8L6 244 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 FBXO36Q8NEA4 188 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 FAM46DQ8NEK8 389 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 CCDC110Q8TBZ0 833 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 ECHDC3Q96DC8 303 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 WDR92Q96MX6 357 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 PWWP2AQ96N64 755 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 EPN3Q9H201 632 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 LRRN3Q9H3W5 708 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 C10orf88Q9H8K7 445 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 SSU72Q9NP77 194 aaKnown RBP9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 THSD1Q9NS62 852 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 SPATS2LQ9NUQ6 558 aaKnown RBP9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 EURLQ9NYK6 297 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 PSMC3IPQ9P2W1 217 aaPredicted RBP9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 B4GALT6Q9UBX8 382 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 KLQ9UEF7 1012 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 MOSPD1Q9UJG1 213 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 RNF215Q9Y6U7 377 aa9.33□□□□□ -0.92
TMEM39A-208ENST00000486159 TCRBV7S3A2A0A539 114 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 ARHGAP42A6NI28 874 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 B4DGG1 531 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 GOLGA8MH3BSY2 632 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 B4GAT1O43505 415 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 SUN1O94901 812 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 TNFP01375 233 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 CTPS1P17812 591 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 AK4P27144 223 aaPredicted RBP9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 SLC5A2P31639 672 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 LSP1P33241 339 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 UGT1A5P35504 534 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 ELK3P41970 407 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 ATP1A2P50993 1020 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 MAZP56270 477 aaKnown RBP9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 TMPRSS3P57727 454 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 IFI35P80217 286 aaPredicted RBP9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 BCL2L1Q07817 233 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 VAC14Q08AM6 782 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 WASHC5Q12768 1159 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 TRAF2Q12933 501 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 NAB1Q13506 487 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 PRPSAP1Q14558 356 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 ACOX1Q15067 660 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 AGERQ15109 404 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 ELOCQ15369 112 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 CNGA3Q16281 694 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 LGSNQ5TDP6 509 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 HSD11B1LQ7Z5J1 315 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 TAF8Q7Z7C8 310 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 TSPAN33Q86UF1 283 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 NRROSQ86YC3 692 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 FSTL5Q8N475 847 aaPredicted RBP9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 FBXO39Q8N4B4 442 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 GPR156Q8NFN8 814 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 WDR36Q8NI36 951 aaKnown RBP9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 UHMK1Q8TAS1 419 aaKnown RBP9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 HCAR2Q8TDS4 363 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 PATE1Q8WXA2 126 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 MAML1Q92585 1016 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 ALKBH8Q96BT7 664 aaKnown RBP9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 ZNF641Q96N77 438 aaPredicted RBP9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 DHRS4Q9BTZ2 278 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 CINPQ9BW66 212 aaPredicted RBP9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 C1QTNF7Q9BXJ2 289 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 CCDC134Q9H6E4 229 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 SP110Q9HB58 689 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 NOD2Q9HC29 1040 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 CYP4F12Q9HCS2 524 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 KLHL8Q9P2G9 620 aaPredicted RBP9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 PCDHGA8Q9Y5G5 932 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 IKBKGQ9Y6K9 419 aa9.32□□□□□ -0.92
TMEM39A-208ENST00000486159 CCDC187A0A096LP49 1063 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 MAGEB16A2A368 324 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 SDR42E2A6NKP2 422 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 SMIM23A6NLE4 172 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 D6RAR5 112 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 K7ENP7 123 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 PLD2O14939 933 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 FAM155BO75949 473 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 MAP3K6O95382 1288 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 METTL18O95568 372 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 CPP00450 1065 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 PDHA1P08559 390 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 ALPIP09923 528 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 ELFN1P0C7U0 828 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 CR2P20023 1033 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 LHCGRP22888 699 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 PTPN3P26045 913 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 ETV3P41162 512 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 MSH2P43246 934 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 SLCO1A2P46721 670 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 CSNK1DP48730 415 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 RPIAP49247 311 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 OR1D5P58170 312 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 GPX6P59796 221 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 B4GALNT1Q00973 533 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 IL10RBQ08334 325 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 MTM1Q13496 603 aa9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 FRG1Q14331 258 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-208ENST00000486159 LBRQ14739 615 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms