RNA–Protein interactions for RNA: ENST00000486042.1

PHC3-211, Transcript of polyhomeotic homolog 3, humanhuman

TSL 3

Gene PHC3, Length 680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-211ENST00000486042 SEBOXQ9HB31 216 aaPredicted RBP3.54□□□□□ -1.84
PHC3-211ENST00000486042 EPB41L5Q9HCM4 733 aa3.54□□□□□ -1.84
PHC3-211ENST00000486042 ZCCHC17Q9NP64 241 aaKnown RBP3.54□□□□□ -1.84
PHC3-211ENST00000486042 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.54□□□□□ -1.84
PHC3-211ENST00000486042 RBM28Q9NW13 759 aaKnown RBP3.54□□□□□ -1.84
PHC3-211ENST00000486042 WDR35Q9P2L0 1181 aa3.54□□□□□ -1.84
PHC3-211ENST00000486042 NFKBIL1Q9UBC1 381 aaPredicted RBP3.54□□□□□ -1.84
PHC3-211ENST00000486042 UBA2Q9UBT2 640 aaPredicted RBP3.54□□□□□ -1.84
PHC3-211ENST00000486042 GIMAP2Q9UG22 337 aa3.54□□□□□ -1.84
PHC3-211ENST00000486042 MAGED1Q9Y5V3 778 aaPredicted RBP3.54□□□□□ -1.84
PHC3-211ENST00000486042 FAM169AQ9Y6X4 670 aa3.54□□□□□ -1.84
PHC3-211ENST00000486042 SCN5AQ14524 2016 aa3.54□□□□□ -1.84
PHC3-211ENST00000486042 ATXN2Q99700 1313 aaKnown RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 ZNF644Q9H582 1327 aaPredicted RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 CENPJQ9HC77 1338 aaPredicted RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 LOC100509620A0A075B734 347 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 SMAD9O15198 467 aaKnown RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 IPO8O15397 1037 aaKnown RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 NDUFS7O75251 213 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 CSPG5O95196 566 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 CH25HO95992 272 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 EGFP01133 1207 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 P4HA1P13674 534 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 MMP9P14780 707 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 TRIM21P19474 475 aaKnown RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 HOXD10P28358 340 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 C21orf33P30042 268 aaPredicted RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 HOXA11P31270 313 aaPredicted RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 MSH2P43246 934 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 LMAN1P49257 510 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 CSE1LP55060 971 aaKnown RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 CSNK2A1P68400 391 aaPredicted RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 SLC20A2Q08357 652 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 Q0VFX4 171 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 SREBF2Q12772 1141 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 GRSF1Q12849 480 aaKnown RBP eCLIP3.53□□□□□ -1.84
PHC3-211ENST00000486042 COX10Q12887 443 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 CDC16Q13042 620 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 TNFAIP1Q13829 316 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 BAATQ14032 418 aaPredicted RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 PSMD6Q15008 389 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 RASA2Q15283 850 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 DLG2Q15700 870 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 TMEM266Q2M3C6 531 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 C15orf59Q2T9L4 293 aaPredicted RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 IGSF11Q5DX21 431 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 DCST1Q5T197 706 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 KRT79Q5XKE5 535 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 RPUSD3Q6P087 351 aaKnown RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 DUS1LQ6P1R4 473 aaKnown RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 KCTD18Q6PI47 426 aaPredicted RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 SLC36A4Q6YBV0 504 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 EPHX4Q8IUS5 362 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 MCEMP1Q8IX19 187 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 BEST3Q8N1M1 668 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 PRR26Q8N8Z3 221 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 SYT2Q8N9I0 419 aaPredicted RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 AVL9Q8NBF6 648 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 KCTD6Q8NC69 237 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 CSNK2A3Q8NEV1 391 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 OR1J2Q8NGS2 313 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 OR14A16Q8NHC5 309 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 HM13Q8TCT9 377 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 GRAMD2BQ96HH9 432 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 TSGA13Q96PP4 275 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 ABHD1Q96SE0 405 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 KLHL4Q9C0H6 718 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 C17orf75Q9HAS0 396 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 SLC35C2Q9NQQ7 365 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 HIF1ANQ9NWT6 349 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 PSD3Q9NYI0 1048 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 MARCH4Q9P2E8 410 aaPredicted RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 PCSK1NQ9UHG2 260 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 TINAGQ9UJW2 476 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 GTF3C4Q9UKN8 822 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 AGO1Q9UL18 857 aaKnown RBP3.53□□□□□ -1.84
PHC3-211ENST00000486042 PLAGL1Q9UM63 463 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 ATAD2BQ9ULI0 1458 aa3.53□□□□□ -1.84
PHC3-211ENST00000486042 LOC102723996A0A087X1L8 192 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 A0A1B0GUV1 79 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 A0A1B0GVY2 172 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 LNP1A1A4G5 178 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 CPED1A4D0V7 1026 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 SOCS6O14544 535 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 MAP2K7O14733 419 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 SPINT2O43291 252 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 PLRG1O43660 514 aaKnown RBP3.52□□□□□ -1.85
PHC3-211ENST00000486042 DKC1O60832 514 aaKnown RBP eCLIP3.52□□□□□ -1.85
PHC3-211ENST00000486042 AVILO75366 819 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 KCNK5O95279 499 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 ACAA1P09110 424 aaPredicted RBP3.52□□□□□ -1.85
PHC3-211ENST00000486042 ATP6V1B1P15313 513 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 BDKRB2P30411 391 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 HNRNPH2P55795 449 aaKnown RBP3.52□□□□□ -1.85
PHC3-211ENST00000486042 UBASH3AP57075 661 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 KRTAP10-3P60369 221 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 ECT2LQ008S8 904 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 CXCL9Q07325 125 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 FOXM1Q08050 763 aa3.52□□□□□ -1.85
PHC3-211ENST00000486042 PRPF4BQ13523 1007 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms