RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 TIMM29Q9BSF4 260 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.38■□□□□ 0.37
COL6A1-204ENST00000486023 DPH1Q9BZG8 443 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 ZCCHC2Q9C0B9 1178 aaKnown RBP17.38■□□□□ 0.37
COL6A1-204ENST00000486023 PSMD13Q9UNM6 376 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 ZNF148Q9UQR1 794 aa17.38■□□□□ 0.37
COL6A1-204ENST00000486023 ARHGEF17Q96PE2 2063 aaPredicted RBP17.38■□□□□ 0.37
COL6A1-204ENST00000486023 A6NCN8 305 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 OR52A4PA6NMU1 304 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 PPFIA2O75334 1257 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 SRP72O76094 671 aaKnown RBP17.37■□□□□ 0.37
COL6A1-204ENST00000486023 CCDC175P0C221 793 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 LMAN1P49257 510 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 TGIF1Q15583 401 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 TMEM164Q5U3C3 297 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 TMEM71Q6P5X7 295 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 MICALCLQ6ZW33 695 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 CLEC14AQ86T13 490 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 AMZ2Q86W34 360 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 ZFAND4Q86XD8 727 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 BEND7Q8N7W2 519 aaPredicted RBP17.37■□□□□ 0.37
COL6A1-204ENST00000486023 JPH3Q8WXH2 748 aaPredicted RBP17.37■□□□□ 0.37
COL6A1-204ENST00000486023 TMEM159Q96B96 161 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 CXorf40BQ96DE9 158 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 SGF29Q96ES7 293 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 PPP1R2P1Q96PQ5 205 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 PRORYQ9H606 182 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 CRLS1Q9UJA2 301 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 UNC13CQ8NB66 2214 aa17.37■□□□□ 0.37
COL6A1-204ENST00000486023 COL27A1Q8IZC6 1860 aaPredicted RBP17.36■□□□□ 0.37
COL6A1-204ENST00000486023 CCDC78A2IDD5 438 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 EIF4E1BA6NMX2 242 aaKnown RBP17.36■□□□□ 0.37
COL6A1-204ENST00000486023 EFCAB7A8K855 629 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 GAPDHSO14556 408 aaPredicted RBP17.36■□□□□ 0.37
COL6A1-204ENST00000486023 ZNF189O75820 626 aaPredicted RBP17.36■□□□□ 0.37
COL6A1-204ENST00000486023 AMD1P17707 334 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 SLC19A1P41440 591 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 HALP42357 657 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 MLLT3P42568 568 aaPredicted RBP17.36■□□□□ 0.37
COL6A1-204ENST00000486023 CLCNKAP51800 687 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 TMPRSS3P57727 454 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 CLN3Q13286 438 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 POU6F1Q14863 301 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 CLPPQ16740 277 aaPredicted RBP17.36■□□□□ 0.37
COL6A1-204ENST00000486023 DENND5AQ6IQ26 1287 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 GPR155Q7Z3F1 870 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 PRUNE1Q86TP1 453 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 LRRC8AQ8IWT6 810 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 DDHD1Q8NEL9 900 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 SLC35B2Q8TB61 432 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 DCUN1D1Q96GG9 259 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 ALS2CR12Q96Q35 445 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 LRRC40Q9H9A6 602 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 FOXJ2Q9P0K8 574 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 ZNF624Q9P2J8 865 aaPredicted RBP17.36■□□□□ 0.37
COL6A1-204ENST00000486023 WDR37Q9Y2I8 494 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 KIF26BQ2KJY2 2108 aa17.36■□□□□ 0.37
COL6A1-204ENST00000486023 C9orf172C9J069 976 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 THRAP10827 490 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 FGF3P11487 239 aaPredicted RBP17.35■□□□□ 0.37
COL6A1-204ENST00000486023 ETS1P14921 441 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 XRCC1P18887 633 aaPredicted RBP17.35■□□□□ 0.37
COL6A1-204ENST00000486023 PDE1BQ01064 536 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 NFE2L1Q14494 772 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 CLCA4Q14CN2 919 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 LONRF2Q1L5Z9 754 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 MEI1Q5TIA1 1274 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 TAS2R42Q7RTR8 314 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 C11orf96Q7Z7L8 435 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 SLC13A5Q86YT5 568 aaPredicted RBP17.35■□□□□ 0.37
COL6A1-204ENST00000486023 AGBL5Q8NDL9 886 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 OCIAD1Q9NX40 245 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 SLC39A1Q9NY26 324 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 PCDHGA7Q9Y5G6 932 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 SLC30A1Q9Y6M5 507 aa17.35■□□□□ 0.37
COL6A1-204ENST00000486023 E7EVH7 732 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 HGSO14964 777 aaPredicted RBP17.34■□□□□ 0.37
COL6A1-204ENST00000486023 NVLO15381 856 aaKnown RBP17.34■□□□□ 0.37
COL6A1-204ENST00000486023 LIASO43766 372 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 NRDCO43847 1150 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 POLBP06746 335 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 BRAFP15056 766 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 MC4RP32245 332 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 UBE2IP63279 158 aaKnown RBP17.34■□□□□ 0.37
COL6A1-204ENST00000486023 TRA2AQ13595 282 aaKnown RBP eCLIP17.34■□□□□ 0.37
COL6A1-204ENST00000486023 P3H1Q32P28 736 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 SOWAHCQ53LP3 525 aaPredicted RBP17.34■□□□□ 0.37
COL6A1-204ENST00000486023 ZRANB3Q5FWF4 1079 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 CCDC81Q6ZN84 652 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 FAM83HQ6ZRV2 1179 aaPredicted RBP17.34■□□□□ 0.37
COL6A1-204ENST00000486023 TMEM26Q6ZUK4 368 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 DNAAF3Q8N9W5 541 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 DTX3LQ8TDB6 740 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 ART4Q93070 314 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 PMEPA1Q969W9 287 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 DNAJC1Q96KC8 554 aaKnown RBP17.34■□□□□ 0.37
COL6A1-204ENST00000486023 TGM7Q96PF1 710 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 TAAR9Q96RI9 348 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 CTRCQ99895 268 aa17.34■□□□□ 0.37
COL6A1-204ENST00000486023 DPYSL5Q9BPU6 564 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms