RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 GPR34Q9UPC5 381 aa23.31■■□□□ 1.32
ABCF3-216ENST00000485921 EIF3HO15372 352 aaKnown RBP eCLIP23.3■■□□□ 1.32
ABCF3-216ENST00000485921 SIGLEC6O43699 453 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 CBFA2T3O75081 653 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 ZNF7P17097 686 aaPredicted RBP23.3■■□□□ 1.32
ABCF3-216ENST00000485921 PPARGP37231 505 aaPredicted RBP23.3■■□□□ 1.32
ABCF3-216ENST00000485921 FASTKD3Q14CZ7 662 aaKnown RBP23.3■■□□□ 1.32
ABCF3-216ENST00000485921 PLA2G4EQ3MJ16 856 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 MRNIPQ6NTE8 343 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 NEPROQ6NW34 567 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 SLC30A9Q6PML9 568 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 SDCCAG8Q86SQ7 713 aaPredicted RBP23.3■■□□□ 1.32
ABCF3-216ENST00000485921 ZBED8Q8IZ13 594 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 FBXO36Q8NEA4 188 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 FAM46DQ8NEK8 389 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 DEFB124Q8NES8 71 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 SLC32A1Q9H598 525 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 SAYSD1Q9NPB0 183 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 C20orf96Q9NUD7 363 aaPredicted RBP23.3■■□□□ 1.32
ABCF3-216ENST00000485921 ZDHHC18Q9NUE0 388 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 SLC23A2Q9UGH3 650 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 KCNK6Q9Y257 313 aa23.3■■□□□ 1.32
ABCF3-216ENST00000485921 SGTAO43765 313 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 POP7O75817 140 aaKnown RBP23.29■■□□□ 1.32
ABCF3-216ENST00000485921 RHOXF2BP0C7M4 288 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 CSRP1P21291 193 aaKnown RBP23.29■■□□□ 1.32
ABCF3-216ENST00000485921 PMLP29590 882 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 ACTR1BP42025 376 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 NSG1P42857 185 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 TTPAP49638 278 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 ACTR1AP61163 376 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 THOC5Q13769 683 aaKnown RBP23.29■■□□□ 1.32
ABCF3-216ENST00000485921 INSCQ1MX18 579 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 BCL7AQ4VC05 210 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 PACS1Q6VY07 963 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 UNC5AQ6ZN44 842 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 C11orf96Q7Z7L8 435 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 BEND7Q8N7W2 519 aaPredicted RBP23.29■■□□□ 1.32
ABCF3-216ENST00000485921 GPR150Q8NGU9 434 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 IFT81Q8WYA0 676 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 RHOXF2Q9BQY4 288 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 TIMM29Q9BSF4 260 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 FOXP3Q9BZS1 431 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 KLC4Q9NSK0 619 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 TAAR2Q9P1P5 351 aa23.29■■□□□ 1.32
ABCF3-216ENST00000485921 DNMT3AQ9Y6K1 912 aaPredicted RBP23.29■■□□□ 1.32
ABCF3-216ENST00000485921 ARID1BQ8NFD5 2236 aaPredicted RBP23.28■■□□□ 1.32
ABCF3-216ENST00000485921 OR1I1O60431 355 aa23.28■■□□□ 1.32
ABCF3-216ENST00000485921 LDOC1O95751 146 aaPredicted RBP23.28■■□□□ 1.32
ABCF3-216ENST00000485921 C6orf132Q5T0Z8 1188 aa23.28■■□□□ 1.32
ABCF3-216ENST00000485921 STEAP4Q687X5 459 aa23.28■■□□□ 1.32
ABCF3-216ENST00000485921 ZCCHC8Q6NZY4 707 aaKnown RBP23.28■■□□□ 1.32
ABCF3-216ENST00000485921 CCDC25Q86WR0 208 aa23.28■■□□□ 1.32
ABCF3-216ENST00000485921 UNC5BQ8IZJ1 945 aa23.28■■□□□ 1.32
ABCF3-216ENST00000485921 CLDN19Q8N6F1 224 aa23.28■■□□□ 1.32
ABCF3-216ENST00000485921 BAHD1Q8TBE0 780 aaPredicted RBP23.28■■□□□ 1.32
ABCF3-216ENST00000485921 CDC6Q99741 560 aa23.28■■□□□ 1.32
ABCF3-216ENST00000485921 FAM129AQ9BZQ8 928 aa23.28■■□□□ 1.32
ABCF3-216ENST00000485921 DPEP2Q9H4A9 486 aa23.28■■□□□ 1.32
ABCF3-216ENST00000485921 PLAC1Q9HBJ0 212 aa23.28■■□□□ 1.32
ABCF3-216ENST00000485921 SPATS2LQ9NUQ6 558 aaKnown RBP23.28■■□□□ 1.32
ABCF3-216ENST00000485921 DLL3Q9NYJ7 618 aa23.28■■□□□ 1.32
ABCF3-216ENST00000485921 FTSJ1Q9UET6 329 aa23.28■■□□□ 1.32
ABCF3-216ENST00000485921 PRSS21Q9Y6M0 314 aa23.28■■□□□ 1.32
ABCF3-216ENST00000485921 NDUFS3O75489 264 aa23.27■■□□□ 1.32
ABCF3-216ENST00000485921 AP2A2O94973 939 aa23.27■■□□□ 1.32
ABCF3-216ENST00000485921 OGNP20774 298 aaKnown RBP23.27■■□□□ 1.32
ABCF3-216ENST00000485921 PRLHRP49683 370 aa23.27■■□□□ 1.32
ABCF3-216ENST00000485921 AMZ2Q86W34 360 aa23.27■■□□□ 1.32
ABCF3-216ENST00000485921 KCNMB4Q86W47 210 aa23.27■■□□□ 1.32
ABCF3-216ENST00000485921 FAM181AQ8N9Y4 354 aa23.27■■□□□ 1.32
ABCF3-216ENST00000485921 PYROXD1Q8WU10 500 aa23.27■■□□□ 1.32
ABCF3-216ENST00000485921 CNDP2Q96KP4 475 aaKnown RBP23.27■■□□□ 1.32
ABCF3-216ENST00000485921 APOLD1Q96LR9 279 aa23.27■■□□□ 1.32
ABCF3-216ENST00000485921 TCF12Q99081 682 aa23.27■■□□□ 1.32
ABCF3-216ENST00000485921 PHACTR1Q9C0D0 580 aa23.27■■□□□ 1.32
ABCF3-216ENST00000485921 SIRPGQ9P1W8 387 aa23.27■■□□□ 1.32
ABCF3-216ENST00000485921 DNAJC16Q9Y2G8 782 aa23.27■■□□□ 1.32
ABCF3-216ENST00000485921 DCDC2BA2VCK2 349 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 KCNJ13O60928 360 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 ERVK-10P10266 1014 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 VCLP18206 1134 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 PBLDP30039 288 aaPredicted RBP23.26■■□□□ 1.31
ABCF3-216ENST00000485921 CLCNKAP51800 687 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 HLTFQ14527 1009 aaKnown RBP eCLIP23.26■■□□□ 1.31
ABCF3-216ENST00000485921 TYSND1Q2T9J0 566 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 PROX2Q3B8N5 592 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 HSP90AA5PQ58FG0 334 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 TEX35Q5T0J7 233 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 ZNF470Q6ECI4 717 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 CILP2Q8IUL8 1156 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 IFT20Q8IY31 132 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 CALML6Q8TD86 181 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 LINC00615Q96LM1 132 aaPredicted RBP23.26■■□□□ 1.31
ABCF3-216ENST00000485921 OSGEPL1Q9H4B0 414 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 GULP1Q9UBP9 304 aa23.26■■□□□ 1.31
ABCF3-216ENST00000485921 MTRF1LQ9UGC7 380 aaKnown RBP23.26■■□□□ 1.31
ABCF3-216ENST00000485921 B4DGG1 531 aa23.25■■□□□ 1.31
ABCF3-216ENST00000485921 PFDN6O15212 129 aa23.25■■□□□ 1.31
ABCF3-216ENST00000485921 CARSP49589 748 aaKnown RBP23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms