RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	KIF18A	Q8NI77	898 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	TEKT4	Q8WW24	435 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	FER1L6-AS2	Q96M78	137 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	HGH1	Q9BTY7	390 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	NUP85	Q9BW27	656 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.01	□□□□□ -1.77
FN1-222	ENST00000485567	GOLPH3L	Q9H4A5	285 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	ST6GALNAC4	Q9H4F1	302 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	EBF3	Q9H4W6	596 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	NOL11	Q9H8H0	719 aa	Known RBP	4.01	□□□□□ -1.77
FN1-222	ENST00000485567	MBNL1	Q9NR56	388 aa	Known RBP	4.01	□□□□□ -1.77
FN1-222	ENST00000485567	ARGLU1	Q9NWB6	273 aa	Predicted RBP	4.01	□□□□□ -1.77
FN1-222	ENST00000485567	ELOVL5	Q9NYP7	299 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	RCC2	Q9P258	522 aa	Known RBP	4.01	□□□□□ -1.77
FN1-222	ENST00000485567	ANAPC5	Q9UJX4	755 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	FBXL2	Q9UKC9	423 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	GTF3C4	Q9UKN8	822 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	ACAD8	Q9UKU7	415 aa		4.01	□□□□□ -1.77
FN1-222	ENST00000485567	SOS1	Q07889	1333 aa	Predicted RBP	4	□□□□□ -1.77
FN1-222	ENST00000485567	TADA2A	O75478	443 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	RFPL2	O75678	378 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	C22orf31	O95567	290 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	GLUD1	P00367	558 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	HOXC6	P09630	235 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	IGHV4-30-4	P0DP06	118 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	KCNA5	P22460	613 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	OAS2	P29728	719 aa	Known RBP	4	□□□□□ -1.77
FN1-222	ENST00000485567	HOXC13	P31276	330 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	MC5R	P33032	325 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	GP5	P40197	560 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	GLUD2	P49448	558 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	CDH13	P55290	713 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	RBP5	P82980	135 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	DDR1	Q08345	913 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	RALGDS	Q12967	914 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	CAMK2D	Q13557	499 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	MELK	Q14680	651 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	PTPRCAP	Q14761	206 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	OASL	Q15646	514 aa	Known RBP	4	□□□□□ -1.77
FN1-222	ENST00000485567	ETFDH	Q16134	617 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	HYAL4	Q2M3T9	481 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	KCNT1	Q5JUK3	1230 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	KRBOX4	Q5JUW0	171 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	TMEM211	Q6ICI0	200 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	WDR73	Q6P4I2	378 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	TEX38	Q6PEX7	206 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	DCLRE1A	Q6PJP8	1040 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	ATG9A	Q7Z3C6	839 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	TECPR1	Q7Z6L1	1165 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	GLRX5	Q86SX6	157 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	GPR180	Q86V85	440 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	GLCCI1	Q86VQ1	547 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	METTL23	Q86XA0	190 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	HSCB	Q8IWL3	235 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	OR8H3	Q8N146	312 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	NDUFAF2	Q8N183	169 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	AFAP1	Q8N556	730 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	SLC5A8	Q8N695	610 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	PRR26	Q8N8Z3	221 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	OR2AK2	Q8NG84	335 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	EXD1	Q8NHP7	514 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	TBC1D16	Q8TBP0	767 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	UTP15	Q8TED0	518 aa	Known RBP	4	□□□□□ -1.77
FN1-222	ENST00000485567	FAM216A	Q8WUB2	273 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	SIPA1	Q96FS4	1042 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	CDHR1	Q96JP9	859 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	LINC00615	Q96LM1	132 aa	Predicted RBP	4	□□□□□ -1.77
FN1-222	ENST00000485567	QRFPR	Q96P65	431 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	LRRC3B	Q96PB8	259 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	MS4A10	Q96PG2	267 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	SPAG5	Q96R06	1193 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	SF3B5	Q9BWJ5	86 aa	Known RBP	4	□□□□□ -1.77
FN1-222	ENST00000485567	PADI3	Q9ULW8	664 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	NME7	Q9Y5B8	376 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	PRAG1	Q86YV5	1406 aa		4	□□□□□ -1.77
FN1-222	ENST00000485567	COL3A1	P02461	1466 aa	Predicted RBP	3.99	□□□□□ -1.77
FN1-222	ENST00000485567	FLT1	P17948	1338 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567		A0A1W2PP11	408 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	hDV102S1	A0JD36	115 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	PI4K2B	G5E9Z4	385 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	CCDC188	H7C350	402 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	WDR46	O15213	610 aa	Known RBP	3.99	□□□□□ -1.77
FN1-222	ENST00000485567	ZBTB43	O43298	467 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	SPRY1	O43609	319 aa	Predicted RBP	3.99	□□□□□ -1.77
FN1-222	ENST00000485567	LIMK1	P53667	647 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	PPARD	Q03181	441 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	TNIP1	Q15025	636 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	RAB6C	Q53S08	254 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	PAPPA-AS1	Q5QFB9	102 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	RGMB	Q6NW40	437 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	C11orf88	Q6PI97	169 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	FAM47E	Q6ZV65	393 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	FBXO39	Q8N4B4	442 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	GOT1L1	Q8NHS2	421 aa	Predicted RBP	3.99	□□□□□ -1.77
FN1-222	ENST00000485567	DEPDC1B	Q8WUY9	529 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	ATL1	Q8WXF7	558 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	WASF1	Q92558	559 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	ATP6V1E2	Q96A05	226 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	FAM162A	Q96A26	154 aa		3.99	□□□□□ -1.77
FN1-222	ENST00000485567	ERLEC1	Q96DZ1	483 aa		3.99	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms