RNA–Protein interactions for RNA: ENST00000485441.5

SRRM1-213, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 3

Gene SRRM1, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-213ENST00000485441 SRRM3A6NNA2 597 aaPredicted RBP5.01□□□□□ -1.61
SRRM1-213ENST00000485441 H3BNX3 289 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 TMEM189-UBE2V1I3L0A0 370 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 HS3ST1O14792 307 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 TO15178 435 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 MID1O15344 667 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 CRYABP02511 175 aaKnown RBP5.01□□□□□ -1.61
SRRM1-213ENST00000485441 IFNAR1P17181 557 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 CORO1AP31146 461 aaKnown RBP5.01□□□□□ -1.61
SRRM1-213ENST00000485441 HOXA11P31270 313 aaPredicted RBP5.01□□□□□ -1.61
SRRM1-213ENST00000485441 MC5RP33032 325 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 CSE1LP55060 971 aaKnown RBP5.01□□□□□ -1.61
SRRM1-213ENST00000485441 MRPS21P82921 87 aaKnown RBP5.01□□□□□ -1.61
SRRM1-213ENST00000485441 UBE2V1Q13404 147 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 MELKQ14680 651 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 HECTD3Q5T447 861 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 CST9LP1Q5W188 147 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 TMEM211Q6ICI0 200 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 RGMBQ6NW40 437 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 FAM198BQ6UWH4 519 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 ZNF575Q86XF7 245 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 PM20D2Q8IYS1 436 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 C1orf87Q8N0U7 546 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 WDR20Q8TBZ3 569 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 UTP15Q8TED0 518 aaKnown RBP5.01□□□□□ -1.61
SRRM1-213ENST00000485441 ABTB1Q969K4 478 aaPredicted RBP5.01□□□□□ -1.61
SRRM1-213ENST00000485441 FER1L6-AS2Q96M78 137 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 SMC6Q96SB8 1091 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 MTERF1Q99551 399 aaKnown RBP5.01□□□□□ -1.61
SRRM1-213ENST00000485441 OLFM1Q99784 485 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 NAA11Q9BSU3 229 aaPredicted RBP5.01□□□□□ -1.61
SRRM1-213ENST00000485441 ABHD6Q9BV23 337 aa5.01□□□□□ -1.61
SRRM1-213ENST00000485441 PRMT7Q9NVM4 692 aaPredicted RBP5.01□□□□□ -1.61
SRRM1-213ENST00000485441 PTPRCP08575 1304 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 PDS5AQ29RF7 1337 aaKnown RBP5□□□□□ -1.61
SRRM1-213ENST00000485441 OR2M5A3KFT3 312 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 CD8B2A6NJW9 211 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 CLGNO14967 610 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 KCNJ13O60928 360 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 SLCO2B1O94956 709 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 CCDC175P0C221 793 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 PCYT1AP49585 367 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 PLCD1P51178 756 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 TROAPQ12815 778 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 XKR9Q5GH70 373 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 GLRX5Q86SX6 157 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 SLC5A8Q8N695 610 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 RBMXL3Q8N7X1 1067 aaKnown RBP5□□□□□ -1.61
SRRM1-213ENST00000485441 PI4KAP1Q8N8J0 262 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 TEKT4Q8WW24 435 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 SPACA9Q96E40 222 aaPredicted RBP5□□□□□ -1.61
SRRM1-213ENST00000485441 C16orf70Q9BSU1 422 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 SF3B5Q9BWJ5 86 aaKnown RBP5□□□□□ -1.61
SRRM1-213ENST00000485441 ANKZF1Q9H8Y5 726 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 CHMP1AQ9HD42 196 aaPredicted RBP5□□□□□ -1.61
SRRM1-213ENST00000485441 KLHL9Q9P2J3 617 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 IL17BQ9UHF5 180 aa5□□□□□ -1.61
SRRM1-213ENST00000485441 DDX25Q9UHL0 483 aaKnown RBP5□□□□□ -1.61
SRRM1-213ENST00000485441 EDDM13A0A1B0GTR0 161 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 LINC01553A4QN01 128 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 LILRA5A6NI73 299 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 H0YIN7 160 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 RECQL5O94762 991 aaPredicted RBP4.99□□□□□ -1.61
SRRM1-213ENST00000485441 LINGO3P0C6S8 592 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 LINC00271P0C7V0 271 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 DANCRP0C864 163 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 PFKFB1P16118 471 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 CTSCP53634 463 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 HNRNPKP61978 463 aaKnown RBP eCLIP4.99□□□□□ -1.61
SRRM1-213ENST00000485441 PDE1BQ01064 536 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 SCARB2Q14108 478 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 KRT33BQ14525 404 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 COG2Q14746 738 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 LETM2Q2VYF4 491 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 KRBOX4Q5JUW0 171 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 ZDHHC20Q5W0Z9 365 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 FIGLAQ6QHK4 219 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 SUSD1Q6UWL2 747 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 GALNTL5Q7Z4T8 443 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 FBXO39Q8N4B4 442 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 B4GALNT2Q8NHY0 566 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 DNAAF4Q8WXU2 420 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 TANKQ92844 425 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 OR6C1Q96RD1 312 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 SLC29A3Q9BZD2 475 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 MYO6Q9UM54 1294 aa4.99□□□□□ -1.61
SRRM1-213ENST00000485441 PCSK5Q92824 1860 aa4.98□□□□□ -1.61
SRRM1-213ENST00000485441 ZNF587BE7ETH6 402 aa4.98□□□□□ -1.61
SRRM1-213ENST00000485441 PLK4O00444 970 aa4.98□□□□□ -1.61
SRRM1-213ENST00000485441 PRAMEF11O60813 436 aa4.98□□□□□ -1.61
SRRM1-213ENST00000485441 KDM4BO94953 1096 aa4.98□□□□□ -1.61
SRRM1-213ENST00000485441 TRUB2O95900 331 aaKnown RBP4.98□□□□□ -1.61
SRRM1-213ENST00000485441 VPREB1P12018 145 aa4.98□□□□□ -1.61
SRRM1-213ENST00000485441 GJA1P17302 382 aa4.98□□□□□ -1.61
SRRM1-213ENST00000485441 DNASE1P24855 282 aa4.98□□□□□ -1.61
SRRM1-213ENST00000485441 PTAFRP25105 342 aa4.98□□□□□ -1.61
SRRM1-213ENST00000485441 HOXC8P31273 242 aa4.98□□□□□ -1.61
SRRM1-213ENST00000485441 TRAF2Q12933 501 aa4.98□□□□□ -1.61
SRRM1-213ENST00000485441 PLCB4Q15147 1175 aa4.98□□□□□ -1.61
SRRM1-213ENST00000485441 RNASEH2BQ5TBB1 312 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms