RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 KRT12Q99456 494 aa13.36□□□□□ -0.27
SOX2-OT-209ENST00000485035 TRIM56Q9BRZ2 755 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-209ENST00000485035 KIFC1Q9BW19 673 aa13.36□□□□□ -0.27
SOX2-OT-209ENST00000485035 MRM3Q9HC36 420 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-209ENST00000485035 XAB2Q9HCS7 855 aaKnown RBP13.36□□□□□ -0.27
SOX2-OT-209ENST00000485035 LRIT1Q9P2V4 623 aa13.36□□□□□ -0.27
SOX2-OT-209ENST00000485035 SOX13Q9UN79 622 aa13.36□□□□□ -0.27
SOX2-OT-209ENST00000485035 NCOR2Q9Y618 2525 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 TRBV23OR9-2A0A075B6M9 112 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 PCNX2A6NKB5 2137 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 PPM1DO15297 605 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 RALBP11234 206 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 F3P13726 295 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 ATP1B2P14415 290 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 PNLIPP16233 465 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 ARNTP27540 789 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 PBLDP30039 288 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 PRLHRP49683 370 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 DRG2P55039 364 aaKnown RBP13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 PRAMEP78395 509 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 DMPKQ09013 629 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 SEMA3AQ14563 771 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 SEPT7Q16181 437 aaKnown RBP13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 IZUMO3Q5VZ72 239 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 IYDQ6PHW0 289 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 CCNI2Q6ZMN8 369 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 SYDE1Q6ZW31 735 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 ZNF438Q7Z4V0 828 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 SPRED1Q7Z699 444 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 AMZ2Q86W34 360 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 Q8N9G6 341 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 OR6P1Q8NGX9 317 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 OR4L1Q8NH43 312 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 SGSM3Q96HU1 749 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 ABCG4Q9H172 646 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 SCHIP1Q9P0W5 487 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 MARCH4Q9P2E8 410 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 MSRB2Q9Y3D2 182 aa13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 ARID1BQ8NFD5 2236 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 CNOT1A5YKK6 2376 aaKnown RBP13.35□□□□□ -0.27
SOX2-OT-209ENST00000485035 A0A1W2PQM1 296 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 RHPN2P1A8MT19 583 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 CFAP99D6REC4 459 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 NTN3O00634 580 aaPredicted RBP13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 MT-CO3P00414 261 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 RPLP0P05388 317 aaKnown RBP13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 BRAFP15056 766 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 VCLP18206 1134 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 RPL10P27635 214 aaKnown RBP13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 FASLGP48023 281 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 CCL7P80098 99 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 MRPS25P82663 173 aaKnown RBP13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 C2orf54Q08AI8 447 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 TARDBPQ13148 414 aaKnown RBP eCLIP13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 DHX34Q14147 1143 aaKnown RBP13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 NFE2L1Q14494 772 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 NR1D2Q14995 579 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 PACS1Q6VY07 963 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 ZNF572Q7Z3I7 529 aaPredicted RBP13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 HOOK3Q86VS8 718 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 CCNJLQ8IV13 435 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 CLDN19Q8N6F1 224 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 DCBLD1Q8N8Z6 715 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 HEXDCQ8WVB3 486 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 TRIM44Q96DX7 344 aaPredicted RBP13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 LINC00615Q96LM1 132 aaPredicted RBP13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 TMEM121BQ9BXQ6 578 aaPredicted RBP13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 CLCA2Q9UQC9 943 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 WDR37Q9Y2I8 494 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 DNMT3AQ9Y6K1 912 aaPredicted RBP13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 PRSS21Q9Y6M0 314 aa13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 TDRD6O60522 2096 aaKnown RBP13.34□□□□□ -0.27
SOX2-OT-209ENST00000485035 KIR2DS5A0A0G2JLQ3 304 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 A0A0G2JNG1 304 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 MGAT4DA6NG13 374 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 SDR42E2A6NKP2 422 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 PDZK1P1A8MUH7 402 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 KIR2DS3K7RE56 304 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 TP73O15350 636 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 OR1I1O60431 355 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 KCNJ13O60928 360 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 SLC2A4P14672 509 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 JUPP14923 745 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 IDSP22304 550 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 PDX1P52945 283 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 CAMK2BQ13554 666 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 ITIH4Q14624 930 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 KIR2DS5Q14953 304 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 CLCA4Q14CN2 919 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 ZNF658BQ4V348 819 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 FASTKD1Q53R41 847 aaKnown RBP13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 AGAP9Q5VTM2 703 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 ARMC3Q5W041 872 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 CASC4Q6P4E1 433 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 WASH2PQ6VEQ5 465 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 PCGF5Q86SE9 256 aa13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 LDB1Q86U70 411 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 ZNF761Q86XN6 746 aaPredicted RBP13.33□□□□□ -0.28
SOX2-OT-209ENST00000485035 CACTIN-AS1Q8N1I8 211 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms