RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-223	ENST00000485024	SLC35F3	Q8IY50	421 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	MB21D2	Q8IYB1	491 aa	Predicted RBP	3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	CCDC13	Q8IYE1	715 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	THNSL1	Q8IYQ7	743 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	GUF1	Q8N442	669 aa	Known RBP	3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	OR8K5	Q8NH50	307 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	VMP1	Q96GC9	406 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	CEP295NL	Q96MC4	621 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	DGAT2	Q96PD7	388 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	GBP5	Q96PP8	586 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	ABHD1	Q96SE0	405 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	SRSF8	Q9BRL6	282 aa	Known RBP	3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	RTN4R	Q9BZR6	473 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	CATSPERB	Q9H7T0	1116 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	GPR108	Q9NPR9	543 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	PIH1D3	Q9NQM4	214 aa	Known RBP	3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	DECR2	Q9NUI1	292 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	CISD1	Q9NZ45	108 aa	Known RBP	3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	HEY2	Q9UBP5	337 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	RASAL2	Q9UJF2	1139 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	ANAPC5	Q9UJX4	755 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	GOLGA3	Q08378	1498 aa		3.91	□□□□□ -1.78
VPS8-223	ENST00000485024	GOLGB1	Q14789	3259 aa	Known RBP	3.9	□□□□□ -1.78
VPS8-223	ENST00000485024	DCC	P43146	1447 aa		3.9	□□□□□ -1.78
VPS8-223	ENST00000485024		A0A1W2PPC1	479 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	TRBC2	A0A5B9	178 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	MAP2K7	O14733	419 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	WNT9B	O14905	357 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	CLDN7	O95471	211 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	VPREB1	P12018	145 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	CHRNB2	P17787	502 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	ERCC2	P18074	760 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	TRIM21	P19474	475 aa	Known RBP	3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	THPO	P40225	353 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	ME1	P48163	572 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	CLCN3	P51790	818 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	GPR143	P51810	404 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	PSMC6	P62333	389 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	ADORA2A-AS1	P86434	159 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	GRSF1	Q12849	480 aa	Known RBP eCLIP	3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	BFSP1	Q12934	665 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	GRAP	Q13588	217 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	SCARB2	Q14108	478 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	KRT33B	Q14525	404 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	INPP5J	Q15735	1006 aa	Predicted RBP	3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	CDON	Q4KMG0	1287 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	LCE3A	Q5TA76	89 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	FBXO46	Q6PJ61	603 aa	Predicted RBP	3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	PARM1	Q6UWI2	310 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	MON1B	Q7L1V2	547 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	NOXA1	Q86UR1	476 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	METTL23	Q86XA0	190 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	GALNT13	Q8IUC8	556 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	SCYL3	Q8IZE3	742 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	B4GALNT2	Q8NHY0	566 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	PTPMT1	Q8WUK0	201 aa	Predicted RBP	3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	TMEM174	Q8WUU8	243 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	LPAR1	Q92633	364 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	IGSF8	Q969P0	613 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	EME1	Q96AY2	570 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	PTER	Q96BW5	349 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	ARSG	Q96EG1	525 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	ACOX2	Q99424	681 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	PAFAH2	Q99487	392 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	NPFFR1	Q9GZQ6	430 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	TKTL2	Q9H0I9	626 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	EPB41L5	Q9HCM4	733 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	HINT3	Q9NQE9	182 aa	Known RBP	3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	WSB2	Q9NYS7	404 aa	Predicted RBP	3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	STK26	Q9P289	416 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	IL36RN	Q9UBH0	155 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	DNAJB4	Q9UDY4	337 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	DDX25	Q9UHL0	483 aa	Known RBP	3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	OSGIN1	Q9UJX0	560 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	TTC7A	Q9ULT0	858 aa	Predicted RBP	3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	ZNF148	Q9UQR1	794 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	STON1	Q9Y6Q2	735 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	UGGT2	Q9NYU1	1516 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	ABCA3	Q99758	1704 aa		3.9	□□□□□ -1.79
VPS8-223	ENST00000485024	ZMYM2	Q9UBW7	1377 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	PIEZO1	Q92508	2521 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	LOC102723996	A0A087X1L8	192 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	GPR75-ASB3	A0A0A6YYF3	556 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024		A0A1B0GVM2	712 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	LNP1	A1A4G5	178 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024		H0YIN7	160 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	SMAD9	O15198	467 aa	Known RBP	3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	CGA	P01215	116 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	GH2	P01242	217 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	MMP9	P14780	707 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	MAOA	P21397	527 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	MCC	P23508	829 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	ACADL	P28330	430 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	MAP2K2	P36507	400 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	PPP3CC	P48454	512 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	CXCR3	P49682	368 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	ENTPD1	P49961	510 aa		3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	CSE1L	P55060	971 aa	Known RBP	3.89	□□□□□ -1.79
VPS8-223	ENST00000485024	TMPRSS3	P57727	454 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms