RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 CPNE7Q9UBL6 633 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 CRLS1Q9UJA2 301 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 PCDHGA8Q9Y5G5 932 aa12.09□□□□□ -0.47
MSH5-216ENST00000484309 KIR2DS5A0A0G2JLQ3 304 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 PRAMEF33A0A0G2JMD5 474 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 A0A0G2JNG1 304 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 IGHV5-10-1A0A0J9YXX1 117 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 GOLGA6L3A6NEY3 463 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 OR52A4PA6NMU1 304 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 TMX2-CTNND1H3BSU7 103 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 KIR2DS3K7RE56 304 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 ZW10O43264 779 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 LDB2O43679 373 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 AP2A1O95782 977 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 FGGP02679 453 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 ZSCAN5DPP0CG00 497 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 PRSS56P0CW18 603 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 SLC2A4P14672 509 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 MSH3P20585 1137 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 MC4RP32245 332 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 LMAN1P49257 510 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 CLCNKAP51800 687 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 ERVPABLB-1P60509 514 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 XIAPP98170 497 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 KIR2DS5Q14953 304 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 CCDC38Q502W7 563 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 FNBP1LQ5T0N5 605 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 FAM83HQ6ZRV2 1179 aaPredicted RBP12.08□□□□□ -0.48
MSH5-216ENST00000484309 ZNF662Q6ZS27 426 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 PDZD3Q86UT5 571 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 TRIM48Q8IWZ4 208 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 SPACA3Q8IXA5 215 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 ZNF248Q8NDW4 579 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 TRIM58Q8NG06 486 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 OR52K1Q8NGK4 314 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 DTX3LQ8TDB6 740 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 KCNE4Q8WWG9 221 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 RTP4Q96DX8 246 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 SGF29Q96ES7 293 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 ZCCHC2Q9C0B9 1178 aaKnown RBP12.08□□□□□ -0.48
MSH5-216ENST00000484309 ETNK1Q9HBU6 452 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 ARNT2Q9HBZ2 717 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 SMOXQ9NWM0 555 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 ZNF624Q9P2J8 865 aaPredicted RBP12.08□□□□□ -0.48
MSH5-216ENST00000484309 KLHL3Q9UH77 587 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 PSMD13Q9UNM6 376 aa12.08□□□□□ -0.48
MSH5-216ENST00000484309 PRR19A6NJB7 356 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 A8MU76 341 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 CDRT15L2A8MXV6 281 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 DUX1O43812 170 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 CEP104O60308 925 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 POP7O75817 140 aaKnown RBP12.07□□□□□ -0.48
MSH5-216ENST00000484309 VIPP01282 170 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 ITGA2BP08514 1039 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 CCL4P13236 92 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 BRAFP15056 766 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 ITGALP20701 1170 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 IDSP22304 550 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 SLC5A2P31639 672 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 SLC19A1P41440 591 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 GRIA1P42261 906 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 CDKN1CP49918 316 aaPredicted RBP12.07□□□□□ -0.48
MSH5-216ENST00000484309 LIMK2P53671 638 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 UBE2IP63279 158 aaKnown RBP12.07□□□□□ -0.48
MSH5-216ENST00000484309 EIF3IQ13347 325 aaKnown RBP12.07□□□□□ -0.48
MSH5-216ENST00000484309 NFE2L1Q14494 772 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 ZRANB3Q5FWF4 1079 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 IGF2-ASQ6U949 168 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 CCDC89Q8N998 374 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 NBEAQ8NFP9 2946 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 OR10G6Q8NH81 332 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 NCSTNQ92542 709 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 FRMD8P1Q9BZ68 369 aaPredicted RBP12.07□□□□□ -0.48
MSH5-216ENST00000484309 FEZ2Q9UHY8 353 aaPredicted RBP12.07□□□□□ -0.48
MSH5-216ENST00000484309 WDR37Q9Y2I8 494 aa12.07□□□□□ -0.48
MSH5-216ENST00000484309 IGSF10Q6WRI0 2623 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 OR51F1A6NGY5 319 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 OR5K4A6NMS3 321 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 E7EVH7 732 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 KLK10O43240 276 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 PSMD3O43242 534 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 PRAMEF10O60809 474 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 THRAP10827 490 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 TYRP1P17643 537 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 VCLP18206 1134 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 STIP1P31948 543 aaKnown RBP12.06□□□□□ -0.48
MSH5-216ENST00000484309 FDFT1P37268 417 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 HADHAP40939 763 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 KCNJ1P48048 391 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 TERF1P54274 439 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 GPLD1P80108 840 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 PDE1BQ01064 536 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 TLE3Q04726 772 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 CLCA4Q14CN2 919 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 LONRF2Q1L5Z9 754 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 PPP1R21Q6ZMI0 780 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 TAS2R42Q7RTR8 314 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 SNX20Q7Z614 316 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 CLEC14AQ86T13 490 aa12.06□□□□□ -0.48
MSH5-216ENST00000484309 AMZ2Q86W34 360 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms