RNA–Protein interactions for RNA: ENST00000484186.5

NUP50-215, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-215ENST00000484186 POLR1CO15160 346 aaPredicted RBP9.27□□□□□ -0.93
NUP50-215ENST00000484186 CAPN5O15484 640 aaPredicted RBP9.27□□□□□ -0.93
NUP50-215ENST00000484186 BUD23O43709 281 aaKnown RBP9.27□□□□□ -0.93
NUP50-215ENST00000484186 PPFIA2O75334 1257 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 AGTP01019 485 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 C9P02748 559 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 ANKRD34CP0C6C1 535 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 SFTPCP11686 197 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 LIFP15018 202 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 TYRP1P17643 537 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 AMD1P17707 334 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 MAP4P27816 1152 aaKnown RBP9.27□□□□□ -0.93
NUP50-215ENST00000484186 RBL1P28749 1068 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 ATP5OP48047 213 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 DRG2P55039 364 aaKnown RBP9.27□□□□□ -0.93
NUP50-215ENST00000484186 GEMP55040 296 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 GFERP55789 205 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 CHRNA6Q15825 494 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 LDLRAP1Q5SW96 308 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 CCDC181Q5TID7 509 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 TMEM220Q6QAJ8 160 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 FAM151BQ6UXP7 276 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 GLT6D1Q7Z4J2 308 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 TRAPPC5Q8IUR0 188 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 RBM12BQ8IXT5 1001 aaKnown RBP9.27□□□□□ -0.93
NUP50-215ENST00000484186 NLGN4XQ8N0W4 816 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 NLGN4YQ8NFZ3 816 aaPredicted RBP9.27□□□□□ -0.93
NUP50-215ENST00000484186 CALR3Q96L12 384 aaKnown RBP9.27□□□□□ -0.93
NUP50-215ENST00000484186 C9orf72Q96LT7 481 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 FERMT1Q9BQL6 677 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 FSD1LQ9BXM9 530 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 ZCCHC2Q9C0B9 1178 aaKnown RBP9.27□□□□□ -0.93
NUP50-215ENST00000484186 C10orf88Q9H8K7 445 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 APMAPQ9HDC9 416 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 SLC40A1Q9NP59 571 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 TRIM10Q9UDY6 481 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 EFR3BQ9Y2G0 817 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 PKP3Q9Y446 797 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 TMEM184BQ9Y519 407 aaPredicted RBP9.27□□□□□ -0.93
NUP50-215ENST00000484186 PCDHA3Q9Y5H8 950 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 DNMT3AQ9Y6K1 912 aaPredicted RBP9.27□□□□□ -0.93
NUP50-215ENST00000484186 COL6A6A6NMZ7 2263 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 KALRNO60229 2985 aa9.27□□□□□ -0.93
NUP50-215ENST00000484186 ATMQ13315 3056 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 LOC101059948A0A1B0GTJ6 334 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 RCCD1A6NED2 376 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 OR52A4PA6NMU1 304 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 STX7O15400 261 aaKnown RBP9.26□□□□□ -0.93
NUP50-215ENST00000484186 TOX3O15405 576 aaPredicted RBP9.26□□□□□ -0.93
NUP50-215ENST00000484186 POP7O75817 140 aaKnown RBP9.26□□□□□ -0.93
NUP50-215ENST00000484186 ANXA9O76027 345 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 STK17BO94768 372 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 NDUFA10O95299 355 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 ZIC2O95409 532 aaPredicted RBP9.26□□□□□ -0.93
NUP50-215ENST00000484186 FAM87AP0C7U9 286 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 ITGB6P18564 788 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 CA5AP35218 305 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 CTNNA1P35221 906 aaKnown RBP9.26□□□□□ -0.93
NUP50-215ENST00000484186 HALP42357 657 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 CTSCP53634 463 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 NAP1L1P55209 391 aaKnown RBP9.26□□□□□ -0.93
NUP50-215ENST00000484186 OTUD4Q01804 1114 aaKnown RBP9.26□□□□□ -0.93
NUP50-215ENST00000484186 DMPKQ09013 629 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 ABHD18Q0P651 414 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 NFATC3Q12968 1075 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 ITGA9Q13797 1035 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 CLCA4Q14CN2 919 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 ITPRIPL1Q6GPH6 555 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 RANBP10Q6VN20 620 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 TIPARPQ7Z3E1 657 aaKnown RBP9.26□□□□□ -0.93
NUP50-215ENST00000484186 AMZ2Q86W34 360 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 TMTC1Q8IUR5 882 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 RASGEF1AQ8N9B8 481 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 DDHD1Q8NEL9 900 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 ZNF398Q8TD17 642 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 CXorf40BQ96DE9 158 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 SLC45A3Q96JT2 553 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 TGM7Q96PF1 710 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 PANX2Q96RD6 677 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 EFHD1Q9BUP0 239 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 FICDQ9BVA6 458 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 FAM117AQ9C073 453 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 GBA3Q9H227 469 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 TRIT1Q9H3H1 467 aaKnown RBP9.26□□□□□ -0.93
NUP50-215ENST00000484186 STARD5Q9NSY2 213 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 SIDT1Q9NXL6 827 aaKnown RBP9.26□□□□□ -0.93
NUP50-215ENST00000484186 EPHA6Q9UF33 1036 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 WDR37Q9Y2I8 494 aa9.26□□□□□ -0.93
NUP50-215ENST00000484186 AAR2Q9Y312 384 aaKnown RBP9.26□□□□□ -0.93
NUP50-215ENST00000484186 GCN1Q92616 2671 aaKnown RBP9.26□□□□□ -0.93
NUP50-215ENST00000484186 ZNF462Q96JM2 2506 aa9.25□□□□□ -0.93
NUP50-215ENST00000484186 CCDC66A2RUB6 948 aa9.25□□□□□ -0.93
NUP50-215ENST00000484186 SOWAHDA6NJG2 315 aa9.25□□□□□ -0.93
NUP50-215ENST00000484186 OR2AG2A6NM03 316 aa9.25□□□□□ -0.93
NUP50-215ENST00000484186 C2orf81A6NN90 581 aa9.25□□□□□ -0.93
NUP50-215ENST00000484186 ZNF891A8MT65 544 aaPredicted RBP9.25□□□□□ -0.93
NUP50-215ENST00000484186 BTNL10A8MVZ5 291 aa9.25□□□□□ -0.93
NUP50-215ENST00000484186 GAPDHSO14556 408 aaPredicted RBP9.25□□□□□ -0.93
NUP50-215ENST00000484186 GPR39O43194 453 aa9.25□□□□□ -0.93
NUP50-215ENST00000484186 SLC28A2O43868 658 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms