RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 APPL2Q8NEU8 664 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 TAS1R2Q8TE23 839 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 NUDCD2Q8WVJ2 157 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 DNAAF4Q8WXU2 420 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 RTP4Q96DX8 246 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 BICD1Q96G01 975 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 MED30Q96HR3 178 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 APOL6Q9BWW8 343 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 TM6SF1Q9BZW5 370 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 SPATC1LQ9H0A9 340 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 DENND2DQ9H6A0 471 aaPredicted RBP5.54□□□□□ -1.52
SF3B1-210ENST00000482158 TAS2R14Q9NYV8 317 aa5.54□□□□□ -1.52
SF3B1-210ENST00000482158 RCC2Q9P258 522 aaKnown RBP5.54□□□□□ -1.52
SF3B1-210ENST00000482158 CGNL1Q0VF96 1302 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 ZNF541Q9H0D2 1346 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 LOC100509620A0A075B734 347 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 MAGEA13PA6NCF6 341 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 MAGEB17A8MXT2 336 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 ZWINTO95229 277 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 TPOP07202 933 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 ZBTB17Q13105 803 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 KEAP1Q14145 624 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 CCDC96Q2M329 555 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 C9orf57Q5W0N0 161 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 TRNP1Q6NT89 227 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 SLC30A6Q6NXT4 461 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 PRSS57Q6UWY2 283 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 ASB18Q6ZVZ8 466 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 HAUS6Q7Z4H7 955 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 CEP57Q86XR8 500 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 SLC5A8Q8N695 610 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 AVL9Q8NBF6 648 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 TBC1D16Q8TBP0 767 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 FIG4Q92562 907 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 LRRC4Q9HBW1 653 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 GDE1Q9NZC3 331 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 CPSF2Q9P2I0 782 aaKnown RBP5.53□□□□□ -1.52
SF3B1-210ENST00000482158 MALT1Q9UDY8 824 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 AMACRQ9UHK6 382 aa5.53□□□□□ -1.52
SF3B1-210ENST00000482158 hCG_1809904A0A1W2PP81 198 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 A0A1W2PPE2 198 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 A0A1W2PR64 198 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 OR2M5A3KFT3 312 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 C5orf60A6NFR6 353 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 HNRNPCL2B2RXH8 293 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 PLK4O00444 970 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 NDUFS4O43181 175 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 BCL10O95999 233 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 DAOP14920 347 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 NR2F2P24468 414 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 PPP5CP53041 499 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 CD81P60033 236 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 ZNF234Q14588 700 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 KIF19Q2TAC6 998 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 ZDHHC20Q5W0Z9 365 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 TEX38Q6PEX7 206 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 PLPPR4Q7Z2D5 763 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 C9orf106Q8NAJ2 232 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 OR52I2Q8NH67 350 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 BBS10Q8TAM1 723 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 DGAT2Q96PD7 388 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 MMP27Q9H306 513 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 DDX31Q9H8H2 851 aaKnown RBP5.52□□□□□ -1.53
SF3B1-210ENST00000482158 UBTD1Q9HAC8 227 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 EBF2Q9HAK2 575 aa5.52□□□□□ -1.53
SF3B1-210ENST00000482158 MBNL1Q9NR56 388 aaKnown RBP5.52□□□□□ -1.53
SF3B1-210ENST00000482158 NFKBIL1Q9UBC1 381 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-210ENST00000482158 ZCWPW2A0A1B0GU75 182 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 OR5K3A6NET4 321 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 A6NL46 340 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 TMEM178BH3BS89 294 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 KCNAB3O43448 404 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 LIG4P49917 911 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 ARSEP51690 589 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 ART1P52961 327 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 CTSCP53634 463 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 SIRPAP78324 504 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 RASA2Q15283 850 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 ERMARDQ5T6L9 678 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 NADSYN1Q6IA69 706 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 DHRS7BQ6IAN0 325 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-210ENST00000482158 FAM109BQ6ICB4 259 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-210ENST00000482158 ZNF517Q6ZMY9 492 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-210ENST00000482158 CCDC191Q8NCU4 936 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 LMO3Q8TAP4 145 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 LNX1Q8TBB1 728 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-210ENST00000482158 LPGAT1Q92604 370 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 TTC14Q96N46 770 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 SYT17Q9BSW7 474 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 SEMA6AQ9H2E6 1030 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 KLHL1Q9NR64 748 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 SELENONQ9NZV5 590 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 ANAPC2Q9UJX6 822 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 RALYQ9UKM9 306 aaKnown RBP5.51□□□□□ -1.53
SF3B1-210ENST00000482158 VDAC3Q9Y277 283 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 DLGAP4Q9Y2H0 992 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 TRPV2Q9Y5S1 764 aa5.51□□□□□ -1.53
SF3B1-210ENST00000482158 CTAGE9A4FU28 777 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 TULP2O00295 520 aa5.5□□□□□ -1.53
SF3B1-210ENST00000482158 ZBTB43O43298 467 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms