RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 PGBD5Q8N414 524 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 CHST14Q8NCH0 376 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 MNS1Q8NEH6 495 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 CXorf40AQ8TE69 158 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 PDCD6IPQ8WUM4 868 aaKnown RBP6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 C1orf54Q8WWF1 131 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 ATOH1Q92858 354 aaPredicted RBP6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 MAGOHBQ96A72 148 aaKnown RBP6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 ECHDC3Q96DC8 303 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 FEM1CQ96JP0 617 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 ZC3H10Q96K80 434 aaKnown RBP6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 HERPUD2Q9BSE4 406 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 TMEM121Q9BTD3 319 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 C1QTNF7Q9BXJ2 289 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 FSD1LQ9BXM9 530 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 TDRD1Q9BXT4 1180 aaKnown RBP6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 GBA3Q9H227 469 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 CDIP1Q9H305 208 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 EPB41L1Q9H4G0 881 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 MTG2Q9H4K7 406 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 USP29Q9HBJ7 922 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 PCDH9Q9HC56 1237 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 GPR27Q9NS67 375 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 WSB2Q9NYS7 404 aaPredicted RBP6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 HACD3Q9P035 362 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 CDC23Q9UJX2 597 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 PPIL1Q9Y3C6 166 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 RAI2Q9Y5P3 530 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 ACTL7AQ9Y615 435 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 PIKFYVEQ9Y2I7 2098 aa6.71□□□□□ -1.33
CTNNB1-213ENST00000482042 TBC1D3DA0A087WVF3 549 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 TBC1D3IA0A087WXS9 549 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 TBC1D3EA0A087X179 549 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 TBC1D3KA0A087X1G2 549 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 TBC1D3FA6NER0 549 aaPredicted RBP6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 ANTXRLA6NF34 631 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 PRR5-ARHGAP8B1AHC4 643 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 ANKRD66B4E2M5 251 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 TBC1D3LB9A6J9 549 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 E7EVH7 732 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 NEMP1O14524 444 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 HGSO14964 777 aaPredicted RBP6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 PRICKLE3O43900 615 aaPredicted RBP6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 DLX3O60479 287 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 MAGEC1O60732 1142 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 URI1O94763 535 aaPredicted RBP6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 PGLSO95336 258 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 IFNB1P01574 187 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 FGF1P05230 155 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 PYGLP06737 847 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 TBC1D3HP0C7X1 549 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 GNSP15586 552 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 HOXD12P35452 270 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 DRD3P35462 400 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 COILP38432 576 aaPredicted RBP6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 CD86P42081 329 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 RGRP47804 291 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 LMAN1P49257 510 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 CCR5P51681 352 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 ITGA1P56199 1179 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 RPS21P63220 83 aaKnown RBP6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 CDK16Q00536 496 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 PDE1BQ01064 536 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 DSC2Q02487 901 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 CDK18Q07002 472 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 CNTN1Q12860 1018 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 SNX1Q13596 522 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 ARHGEF7Q14155 803 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 SIM2Q14190 667 aaPredicted RBP6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 RTP5Q14D33 572 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 SIX1Q15475 284 aaPredicted RBP6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 CR1LQ2VPA4 569 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 TMEM52BQ4KMG9 183 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 SETMARQ53H47 684 aaPredicted RBP6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 DNTTIP2Q5QJE6 756 aaKnown RBP6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 AGBL4Q5VU57 503 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 ARMC3Q5W041 872 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 STEAP3Q658P3 488 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 TBC1D3GQ6DHY5 549 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 TBC1D3CQ6IPX1 549 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 NAPEPLDQ6IQ20 393 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 PARS2Q7L3T8 475 aaKnown RBP6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 MAATS1Q7Z4T9 603 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 TRIM69Q86WT6 500 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 CAMK1DQ8IU85 385 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 TBC1D3Q8IZP1 549 aaPredicted RBP6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 AADATQ8N5Z0 425 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 OR14C36Q8NHC7 312 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 ARRDC2Q8TBH0 407 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 COG1Q8WTW3 980 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 ASB12Q8WXK4 309 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 ARRDC3Q96B67 414 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 SKA1Q96BD8 255 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 RMDN1Q96DB5 314 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 SCRN2Q96FV2 425 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 TOE1Q96GM8 510 aaKnown RBP6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 MS4A14Q96JA4 679 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 CAPZA3Q96KX2 299 aa6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 RBM15Q96T37 977 aaKnown RBP eCLIP6.7□□□□□ -1.34
CTNNB1-213ENST00000482042 SYT3Q9BQG1 590 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms