RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 CALRP27797 417 aaKnown RBP14.3□□□□□ -0.12
CHD3-211ENST00000481999 PRDX3P30048 256 aaKnown RBP14.3□□□□□ -0.12
CHD3-211ENST00000481999 ROR2Q01974 943 aaKnown RBP14.3□□□□□ -0.12
CHD3-211ENST00000481999 LAMB3Q13751 1172 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 PDK3Q15120 406 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 LRRC66Q68CR7 880 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 SERPINA9Q86WD7 417 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 ZFAND2BQ8WV99 257 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 ATP13A3Q9H7F0 1226 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 EML4Q9HC35 981 aaKnown RBP14.3□□□□□ -0.12
CHD3-211ENST00000481999 SCN8AQ9UQD0 1980 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 SUPT3HB4E1H0 165 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 SUPT3HO75486 399 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 ECI2O75521 394 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 IGSF6O95976 241 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 PENKP01210 267 aaPredicted RBP14.3□□□□□ -0.12
CHD3-211ENST00000481999 PKNOX1P55347 436 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 LIN52Q52LA3 116 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 FUBP1Q96AE4 644 aaKnown RBP14.3□□□□□ -0.12
CHD3-211ENST00000481999 LINGO1Q96FE5 620 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 C3orf30Q96M34 536 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 Q9H521 79 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 FBRSL1Q9HCM7 1045 aaKnown RBP14.3□□□□□ -0.12
CHD3-211ENST00000481999 SEMA4BQ9NPR2 832 aaPredicted RBP14.3□□□□□ -0.12
CHD3-211ENST00000481999 LZTS1Q9Y250 596 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 ZNF510Q9Y2H8 683 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 SLC30A1Q9Y6M5 507 aa14.3□□□□□ -0.12
CHD3-211ENST00000481999 CAPN8A6NHC0 703 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 E5RI56 91 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 TXNDC9O14530 226 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 BCAS2O75934 225 aaPredicted RBP14.29□□□□□ -0.12
CHD3-211ENST00000481999 TTPAP49638 278 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 CHN2P52757 468 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 HK3P52790 923 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 METAP1P53582 386 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 MRPS22P82650 360 aaKnown RBP14.29□□□□□ -0.12
CHD3-211ENST00000481999 FOLH1Q04609 750 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 NFATC2Q13469 925 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 CHRNA6Q15825 494 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 MYLK3Q32MK0 819 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 UGT3A1Q6NUS8 523 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 CRTC1Q6UUV9 634 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 TRPC4APQ8TEL6 797 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 MRPL1Q9BYD6 325 aaKnown RBP14.29□□□□□ -0.12
CHD3-211ENST00000481999 CIPCQ9C0C6 399 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 RNF112Q9ULX5 631 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 HS3ST2Q9Y278 367 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 MRPS23Q9Y3D9 190 aaKnown RBP14.29□□□□□ -0.12
CHD3-211ENST00000481999 CARNS1A5YM72 827 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 MTX2O75431 263 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 IMPDH1P20839 514 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 MLLT1Q03111 559 aaPredicted RBP14.29□□□□□ -0.12
CHD3-211ENST00000481999 ADGRE1Q14246 886 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 PELI3Q8N2H9 469 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 BHLHE22Q8NFJ8 381 aaPredicted RBP14.29□□□□□ -0.12
CHD3-211ENST00000481999 DCUN1D1Q96GG9 259 aa14.29□□□□□ -0.12
CHD3-211ENST00000481999 YBX2Q9Y2T7 364 aaKnown RBP14.29□□□□□ -0.12
CHD3-211ENST00000481999 OAS3Q9Y6K5 1087 aaKnown RBP14.29□□□□□ -0.12
CHD3-211ENST00000481999 H7C0S8 307 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 DENRO43583 198 aaKnown RBP14.28□□□□□ -0.12
CHD3-211ENST00000481999 AP1G1O43747 822 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 TRIM16O95361 564 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 PSMA3P25788 255 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 SERPINA4P29622 427 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 EEF1DP29692 281 aaKnown RBP14.28□□□□□ -0.12
CHD3-211ENST00000481999 POLE2P56282 527 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 HERVK_113P63132 956 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 PTSQ03393 145 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 MAPRE2Q15555 327 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 ARHGAP15Q53QZ3 475 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 ADCY4Q8NFM4 1077 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 VN1R2Q8NFZ6 395 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 OR2A12Q8NGT7 310 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 SH3GL3Q99963 347 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 ERVK-6Q9BXR3 956 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 ATG2BQ96BY7 2078 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 KRT87PA6NCN2 255 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 C9JVG2 144 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 RFXAPO00287 272 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 CDK14O94921 469 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 DPP6P42658 865 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 CLCN7P51798 805 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 SNRPD1P62314 119 aaKnown RBP14.28□□□□□ -0.12
CHD3-211ENST00000481999 MS4A2Q01362 244 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 STX5Q13190 355 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 SHHQ15465 462 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 CWF19L1Q69YN2 538 aaKnown RBP14.28□□□□□ -0.12
CHD3-211ENST00000481999 UGT2A3Q6UWM9 527 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 CHSY3Q70JA7 882 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 MARVELD2Q8N4S9 558 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 KLHL32Q96NJ5 620 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 NPAS2Q99743 824 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 SPATA16Q9BXB7 569 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 TRIM4Q9C037 500 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 P2RY12Q9H244 342 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 SUV39H2Q9H5I1 410 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 MID1IP1Q9NPA3 183 aa14.28□□□□□ -0.12
CHD3-211ENST00000481999 MRPL40Q9NQ50 206 aaKnown RBP14.28□□□□□ -0.12
CHD3-211ENST00000481999 TRMT6Q9UJA5 497 aaKnown RBP14.28□□□□□ -0.12
CHD3-211ENST00000481999 RIMS3Q9UJD0 308 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms