RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 ZNF567Q8N184 647 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 GALNT15Q8N3T1 639 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.19□□□□□ -1.42
SF3B1-209ENST00000479532 FAM71DQ8N9W8 422 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 CHST14Q8NCH0 376 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 MDGA1Q8NFP4 955 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 OR6K2Q8NGY2 324 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 SLC35B2Q8TB61 432 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 COG1Q8WTW3 980 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 ATG4AQ8WYN0 398 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 TEKT5Q96M29 485 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 SPATA13Q96N96 652 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 KLHL32Q96NJ5 620 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 FCRL5Q96RD9 977 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 HERPUD2Q9BSE4 406 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 TMEM121Q9BTD3 319 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 FSD1LQ9BXM9 530 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 AP1M1Q9BXS5 423 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 ADGRE3Q9BY15 652 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 TPSD1Q9BZJ3 242 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 BTBD1Q9H0C5 482 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 SLC25A51Q9H1U9 297 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 GBA3Q9H227 469 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 MTG2Q9H4K7 406 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 CAAP1Q9H8G2 361 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 SGK2Q9HBY8 427 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 GLOD4Q9HC38 313 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 ITM2CQ9NQX7 267 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 VPS45Q9NRW7 570 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 ZSCAN32Q9NX65 697 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 FBXL12Q9NXK8 326 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 PAK5Q9P286 719 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 CIDEBQ9UHD4 219 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 RAB23Q9ULC3 237 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 FZD4Q9ULV1 537 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 R3HDM2Q9Y2K5 976 aaKnown RBP6.19□□□□□ -1.42
SF3B1-209ENST00000479532 PCDHGA2Q9Y5H1 932 aa6.19□□□□□ -1.42
SF3B1-209ENST00000479532 TNPO3Q9Y5L0 923 aaKnown RBP6.19□□□□□ -1.42
SF3B1-209ENST00000479532 C16orf96A6NNT2 1141 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 ZNF821O75541 412 aaPredicted RBP6.18□□□□□ -1.42
SF3B1-209ENST00000479532 GCATO75600 419 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 RPP40O75818 363 aaKnown RBP6.18□□□□□ -1.42
SF3B1-209ENST00000479532 RHOBTB1O94844 696 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 RASGRP1O95267 797 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 CTSLP07711 333 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 GSTA1P08263 222 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 ADRB3P13945 408 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 CR2P20023 1033 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 HOXA5P20719 270 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 CD6P30203 668 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 COILP38432 576 aaPredicted RBP6.18□□□□□ -1.42
SF3B1-209ENST00000479532 CD86P42081 329 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 DPP6P42658 865 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 RGRP47804 291 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 PXNP49023 591 aaPredicted RBP6.18□□□□□ -1.42
SF3B1-209ENST00000479532 FNTBP49356 437 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 TPMTP51580 245 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 RPL26P61254 145 aaKnown RBP6.18□□□□□ -1.42
SF3B1-209ENST00000479532 WASHC5Q12768 1159 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 MPP3Q13368 585 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 DHX34Q14147 1143 aaKnown RBP6.18□□□□□ -1.42
SF3B1-209ENST00000479532 ZNF460Q14592 562 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 PPP1R7Q15435 360 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 SIX1Q15475 284 aaPredicted RBP6.18□□□□□ -1.42
SF3B1-209ENST00000479532 OASLQ15646 514 aaKnown RBP6.18□□□□□ -1.42
SF3B1-209ENST00000479532 CYP1B1Q16678 543 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 PARP6Q2NL67 630 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 POM121L1PQ3SYA9 428 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 LACTB2Q53H82 288 aaPredicted RBP6.18□□□□□ -1.42
SF3B1-209ENST00000479532 CAPRIN2Q6IMN6 1127 aaKnown RBP6.18□□□□□ -1.42
SF3B1-209ENST00000479532 TSSK4Q6SA08 328 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.18□□□□□ -1.42
SF3B1-209ENST00000479532 RNF111Q6ZNA4 994 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 USP45Q70EL2 814 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 MAATS1Q7Z4T9 603 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 TTC7BQ86TV6 843 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 FAM124AQ86V42 546 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 CREG2Q8IUH2 290 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 PGBD5Q8N414 524 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 PRELID2Q8N945 189 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 OR14C36Q8NHC7 312 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 CCDC110Q8TBZ0 833 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 CXorf40AQ8TE69 158 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 GAB3Q8WWW8 586 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 RMDN1Q96DB5 314 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 RTP4Q96DX8 246 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 IMP4Q96G21 291 aaKnown RBP6.18□□□□□ -1.42
SF3B1-209ENST00000479532 MAGEB10Q96LZ2 347 aaPredicted RBP6.18□□□□□ -1.42
SF3B1-209ENST00000479532 RBM15Q96T37 977 aaKnown RBP eCLIP6.18□□□□□ -1.42
SF3B1-209ENST00000479532 CCDC28BQ9BUN5 200 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 CDADC1Q9BWV3 514 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 C1QTNF7Q9BXJ2 289 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 PCED1AQ9H1Q7 454 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 SLC6A17Q9H1V8 727 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 ANKZF1Q9H8Y5 726 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 USP29Q9HBJ7 922 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 NOD2Q9HC29 1040 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 CD248Q9HCU0 757 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 AP5S1Q9NUS5 200 aa6.18□□□□□ -1.42
SF3B1-209ENST00000479532 POLR3BQ9NW08 1133 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms