RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 PPP1R8Q12972 351 aaKnown RBP13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 ZNF549Q6P9A3 640 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 ZNF683Q8IZ20 524 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 CADM3Q8N126 398 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 PTCD2Q8WV60 388 aaKnown RBP13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 TRIM54Q9BYV2 358 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 SEMA4BQ9NPR2 832 aaPredicted RBP13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 SPATA7Q9P0W8 599 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 DNMT3BQ9UBC3 853 aaKnown RBP13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 NYNRINQ9P2P1 1898 aaKnown RBP13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 MUSKO15146 869 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 ABCB7O75027 752 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 ALPLP05186 524 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 AGXTP21549 392 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 HPCAL1P37235 193 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 PIGAP37287 484 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 RPS3AP61247 264 aaKnown RBP13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 KCNA10Q16322 511 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 MEP1AQ16819 746 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 MS4A13Q5J8X5 152 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 FAM86B1Q8N7N1 296 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 TMBIM1Q969X1 311 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 IMP4Q96G21 291 aaKnown RBP13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 SUSD3Q96L08 255 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 CCDC68Q9H2F9 335 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 SMURF2Q9HAU4 748 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 EXD2Q9NVH0 621 aa13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 RBMX2Q9Y388 322 aaKnown RBP13.19□□□□□ -0.3
PDZRN3-208ENST00000479530 FGF10O15520 208 aaPredicted RBP13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 E2F6O75461 281 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 FGF4P08620 206 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 IL12AP29459 219 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 ACVRL1P37023 503 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 ZNF135P52742 658 aaPredicted RBP13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 FKBP1BP68106 108 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 ZNF33AQ06730 810 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 RCAN2Q14206 197 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 SELPLGQ14242 412 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 CBX2Q14781 532 aaPredicted RBP13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 AAK1Q2M2I8 961 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 HABP4Q5JVS0 413 aaKnown RBP13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 RAP1GAP2Q684P5 730 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 CRTC3Q6UUV7 619 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 STK32CQ86UX6 486 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 RIMKLAQ8IXN7 391 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 CLEC4FQ8N1N0 589 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 THEM5Q8N1Q8 247 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 DCBLD1Q8N8Z6 715 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 PNPT1Q8TCS8 783 aaKnown RBP13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 BPIFB1Q8TDL5 484 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 TSPAN17Q96FV3 270 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 TBATAQ96M53 351 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 HERC2P3Q9BVR0 1158 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 YTHDF1Q9BYJ9 559 aaKnown RBP13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 SLC25A51Q9H1U9 297 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 CARS2Q9HA77 564 aaKnown RBP13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 RGS18Q9NS28 235 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 HCSTQ9UBK5 93 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 IKZF3Q9UKT9 509 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 H0YAE9 185 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 AQP9O43315 295 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 NOBOXO60393 691 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 JRKO75564 520 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 SERPINH1P50454 418 aaKnown RBP13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 ARPP19P56211 112 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 PLIN5Q00G26 463 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 CRHR2Q13324 411 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 DNASE1L3Q13609 305 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 CTU2Q2VPK5 515 aaKnown RBP13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 SIRPB2Q5JXA9 342 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 LAIR2Q6ISS4 152 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 FBXL22Q6P050 247 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 SLC2A7Q6PXP3 512 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 RASAL3Q86YV0 1011 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 ACOX2Q99424 681 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 TOR3AQ9H497 397 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 UXTQ9UBK9 157 aaPredicted RBP13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 UTS2RQ9UKP6 389 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 B3GNT3Q9Y2A9 372 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 ARL5AQ9Y689 179 aa13.18□□□□□ -0.3
PDZRN3-208ENST00000479530 INMTO95050 263 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 CYBAP13498 195 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 FSHRP23945 695 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 CYP2C18P33260 490 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 ALDH3A2P51648 485 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 KCNK10P57789 538 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 MTPNP58546 118 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 NFKB2Q00653 900 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 SEMA3AQ14563 771 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 RBM23Q86U06 439 aaKnown RBP13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 CCDC117Q8IWD4 279 aaPredicted RBP13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 SCML4Q8N228 414 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 DTWD1Q8N5C7 304 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 ZFP90Q8TF47 636 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 SLC39A13Q96H72 371 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 NSMCE3Q96MG7 304 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 ZNF347Q96SE7 839 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 BDH2Q9BUT1 245 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 PRKD2Q9BZL6 878 aa13.17□□□□□ -0.3
PDZRN3-208ENST00000479530 ATP13A1Q9HD20 1204 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms