RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 USP1O94782 785 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 CDK4P11802 303 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 CKMT2P17540 419 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 PAMP19021 973 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 ARNTP27540 789 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 ARCN1P48444 511 aaKnown RBP26.4■■□□□ 1.82
CCM2-211ENST00000478582 CLCNKAP51800 687 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 CAV1Q03135 178 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 ITIH4Q14624 930 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 DBN1Q16643 649 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 HIF1AQ16665 826 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 FASTKD1Q53R41 847 aaKnown RBP26.4■■□□□ 1.82
CCM2-211ENST00000478582 C6orf132Q5T0Z8 1188 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 OGFOD3Q6PK18 319 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 CHST15Q7LFX5 561 aaPredicted RBP26.4■■□□□ 1.82
CCM2-211ENST00000478582 GALNT15Q8N3T1 639 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 DCUN1D1Q96GG9 259 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 FCRL3Q96P31 734 aaPredicted RBP26.4■■□□□ 1.82
CCM2-211ENST00000478582 EBNA1BP2Q99848 306 aaKnown RBP26.4■■□□□ 1.82
CCM2-211ENST00000478582 L2HGDHQ9H9P8 463 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 PLEKHM1Q9Y4G2 1056 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 MAD1L1Q9Y6D9 718 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 RPS6KL1Q9Y6S9 549 aa26.4■■□□□ 1.82
CCM2-211ENST00000478582 ZCWPW2A0A1B0GU75 182 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 TMEM8BA6NDV4 472 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 BHMG1C9JSJ3 638 aaPredicted RBP26.39■■□□□ 1.82
CCM2-211ENST00000478582 RFPL3O75679 317 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 VAPBO95292 243 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 AK4P27144 223 aaPredicted RBP26.39■■□□□ 1.82
CCM2-211ENST00000478582 ACADVLP49748 655 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 CTSCP53634 463 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 BBS9Q3SYG4 887 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 TMEM220Q6QAJ8 160 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 DHRS13Q6UX07 377 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 C11orf96Q7Z7L8 435 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 CCNJLQ8IV13 435 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 KDF1Q8NAX2 398 aaPredicted RBP26.39■■□□□ 1.82
CCM2-211ENST00000478582 ART4Q93070 314 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 PWWP2AQ96N64 755 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 TTC1Q99614 292 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 TIMM29Q9BSF4 260 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 CARD6Q9BX69 1037 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 CATSPERZQ9NTU4 200 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 NCKIPSDQ9NZQ3 722 aa26.39■■□□□ 1.82
CCM2-211ENST00000478582 E7ESA3 106 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 CD3EAPO15446 510 aaKnown RBP26.38■■□□□ 1.81
CCM2-211ENST00000478582 SGTAO43765 313 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 KCNJ13O60928 360 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 POLBP06746 335 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 ATP1B2P14415 290 aaPredicted RBP26.38■■□□□ 1.81
CCM2-211ENST00000478582 ZNF7P17097 686 aaPredicted RBP26.38■■□□□ 1.81
CCM2-211ENST00000478582 PGAM1P18669 254 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 PPARGP37231 505 aaPredicted RBP26.38■■□□□ 1.81
CCM2-211ENST00000478582 SLC7A5Q01650 507 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 TCEA2Q15560 299 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 SMAD1Q15797 465 aaKnown RBP26.38■■□□□ 1.81
CCM2-211ENST00000478582 BCL7AQ4VC05 210 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 AARS2Q5JTZ9 985 aaKnown RBP26.38■■□□□ 1.81
CCM2-211ENST00000478582 CRTC3Q6UUV7 619 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 PACS1Q6VY07 963 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 TRAPPC5Q8IUR0 188 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 FAM46DQ8NEK8 389 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 ZNF669Q96BR6 464 aaPredicted RBP26.38■■□□□ 1.81
CCM2-211ENST00000478582 SGF29Q96ES7 293 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 APOLD1Q96LR9 279 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 TRIM56Q9BRZ2 755 aaKnown RBP26.38■■□□□ 1.81
CCM2-211ENST00000478582 TAAR2Q9P1P5 351 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 FAM169AQ9Y6X4 670 aa26.38■■□□□ 1.81
CCM2-211ENST00000478582 PRR19A6NJB7 356 aa26.37■■□□□ 1.81
CCM2-211ENST00000478582 TTC4O95801 387 aa26.37■■□□□ 1.81
CCM2-211ENST00000478582 ACP5P13686 325 aa26.37■■□□□ 1.81
CCM2-211ENST00000478582 ACTR1BP42025 376 aa26.37■■□□□ 1.81
CCM2-211ENST00000478582 NSG1P42857 185 aa26.37■■□□□ 1.81
CCM2-211ENST00000478582 ACTR1AP61163 376 aa26.37■■□□□ 1.81
CCM2-211ENST00000478582 ILKQ13418 452 aa26.37■■□□□ 1.81
CCM2-211ENST00000478582 GPR150Q8NGU9 434 aa26.37■■□□□ 1.81
CCM2-211ENST00000478582 GLMNQ92990 594 aa26.37■■□□□ 1.81
CCM2-211ENST00000478582 CCDC97Q96F63 343 aaPredicted RBP26.37■■□□□ 1.81
CCM2-211ENST00000478582 LINC00615Q96LM1 132 aaPredicted RBP26.37■■□□□ 1.81
CCM2-211ENST00000478582 SPATS2LQ9NUQ6 558 aaKnown RBP26.37■■□□□ 1.81
CCM2-211ENST00000478582 SLC23A2Q9UGH3 650 aa26.37■■□□□ 1.81
CCM2-211ENST00000478582 TEX264Q9Y6I9 313 aa26.37■■□□□ 1.81
CCM2-211ENST00000478582 SPEGQ15772 3267 aa26.37■■□□□ 1.81
CCM2-211ENST00000478582 LY6G6EA0A0G2JKS1 128 aa26.36■■□□□ 1.81
CCM2-211ENST00000478582 BANF1O75531 89 aa26.36■■□□□ 1.81
CCM2-211ENST00000478582 AP2A2O94973 939 aa26.36■■□□□ 1.81
CCM2-211ENST00000478582 ACP1P24666 158 aa26.36■■□□□ 1.81
CCM2-211ENST00000478582 SEMA3AQ14563 771 aa26.36■■□□□ 1.81
CCM2-211ENST00000478582 SLC30A9Q6PML9 568 aa26.36■■□□□ 1.81
CCM2-211ENST00000478582 IGDCC3Q8IVU1 814 aa26.36■■□□□ 1.81
CCM2-211ENST00000478582 MARCH4Q9P2E8 410 aaPredicted RBP26.36■■□□□ 1.81
CCM2-211ENST00000478582 U3KQA8 63 aa26.36■■□□□ 1.81
CCM2-211ENST00000478582 EPG5Q9HCE0 2579 aa26.36■■□□□ 1.81
CCM2-211ENST00000478582 KLHL33A6NCF5 533 aa26.35■■□□□ 1.81
CCM2-211ENST00000478582 OR2AG2A6NM03 316 aa26.35■■□□□ 1.81
CCM2-211ENST00000478582 EIF3HO15372 352 aaKnown RBP eCLIP26.35■■□□□ 1.81
CCM2-211ENST00000478582 POP7O75817 140 aaKnown RBP26.35■■□□□ 1.81
CCM2-211ENST00000478582 CKMT1AP12532 417 aa26.35■■□□□ 1.81
CCM2-211ENST00000478582 DEKP35659 375 aaKnown RBP26.35■■□□□ 1.81
CCM2-211ENST00000478582 ELK3P41970 407 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms