RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 PLEKHN1Q494U1 663 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-213ENST00000476777 TDRD12Q587J7 1177 aaKnown RBP11.15□□□□□ -0.62
BRCA1-213ENST00000476777 FKBP15Q5T1M5 1219 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 WASH2PQ6VEQ5 465 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 ZNF547Q8IVP9 402 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 RBM12BQ8IXT5 1001 aaKnown RBP11.15□□□□□ -0.62
BRCA1-213ENST00000476777 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.15□□□□□ -0.62
BRCA1-213ENST00000476777 GLIS1Q8NBF1 620 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 SLC38A9Q8NBW4 561 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 LPCAT1Q8NF37 534 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 ARRDC2Q8TBH0 407 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 MR1Q95460 341 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 EID2BQ96D98 161 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 ZNF514Q96K75 400 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-213ENST00000476777 RANBP9Q96S59 729 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 TIMM29Q9BSF4 260 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 SYT11Q9BT88 431 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 FGF21Q9NSA1 209 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 GPR83Q9NYM4 423 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 PKD2L2Q9NZM6 624 aa11.15□□□□□ -0.62
BRCA1-213ENST00000476777 RPL26L1Q9UNX3 145 aaKnown RBP11.15□□□□□ -0.62
BRCA1-213ENST00000476777 A6NL46 340 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 TMCO5BA8MYB1 307 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 KMOO15229 486 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 SLC25A14O95258 325 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-213ENST00000476777 JCHAINP01591 159 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 TCF4P15884 667 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 IL4RP24394 825 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 PCK1P35558 622 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 DRG2P55039 364 aaKnown RBP11.14□□□□□ -0.63
BRCA1-213ENST00000476777 NIPAL4Q0D2K0 466 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 QPCTQ16769 361 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 INSCQ1MX18 579 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 BOLA3Q53S33 107 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 ANKRD20A8PQ5CZ79 823 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 AGAP9Q5VTM2 703 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 FAM69BQ5VUD6 431 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 CDKAL1Q5VV42 579 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 LCN10Q6JVE6 187 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 LRRC49Q8IUZ0 686 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 IQCKQ8N0W5 287 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 D2HGDHQ8N465 521 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 CISD2Q8N5K1 135 aaKnown RBP11.14□□□□□ -0.63
BRCA1-213ENST00000476777 ENDOVQ8N8Q3 282 aaKnown RBP11.14□□□□□ -0.63
BRCA1-213ENST00000476777 TMEM102Q8N9M5 508 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-213ENST00000476777 CCHCR1Q8TD31 782 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 MAML1Q92585 1016 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 MARVELD3Q96A59 401 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 CXorf40BQ96DE9 158 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 BARD1Q99728 777 aaKnown RBP11.14□□□□□ -0.63
BRCA1-213ENST00000476777 MAP3K3Q99759 626 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 SPATA16Q9BXB7 569 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 CHST8Q9H2A9 424 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 PCDH9Q9HC56 1237 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.14□□□□□ -0.63
BRCA1-213ENST00000476777 G3BP2Q9UN86 482 aaKnown RBP11.14□□□□□ -0.63
BRCA1-213ENST00000476777 SNX7Q9UNH6 387 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 WDR37Q9Y2I8 494 aa11.14□□□□□ -0.63
BRCA1-213ENST00000476777 ANKRD12Q6UB98 2062 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 SPG11Q96JI7 2443 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 HNRNPRO43390 633 aaKnown RBP11.13□□□□□ -0.63
BRCA1-213ENST00000476777 SCRG1O75711 98 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 RAB40ALP0C0E4 278 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 IDSP22304 550 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 CA4P22748 312 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 FECHP22830 423 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 SERPINB6P35237 376 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 UBE2HP62256 183 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 TUBB4BP68371 445 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 RAPSNQ13702 412 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 TUBB2AQ13885 445 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 ZNF569Q5MCW4 686 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 PLEKHS1Q5SXH7 462 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 PPP1R2P3Q6NXS1 205 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 MED25Q71SY5 747 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 LRRTM4Q86VH4 590 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 KMT5CQ86Y97 462 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 TMEM126BQ8IUX1 230 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 ZBTB2Q8N680 514 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 NEK11Q8NG66 645 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 HSPH1Q92598 858 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 GLYATL1Q969I3 302 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 MOCOSQ96EN8 888 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 PCMTD1Q96MG8 357 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-213ENST00000476777 LRFN5Q96NI6 719 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 ZSCAN5AQ9BUG6 496 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 MLPHQ9BV36 600 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-213ENST00000476777 TUBB2BQ9BVA1 445 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 NLNQ9BYT8 704 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 RBM22Q9NW64 420 aaKnown RBP eCLIP11.13□□□□□ -0.63
BRCA1-213ENST00000476777 C5AR2Q9P296 337 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 TRIM10Q9UDY6 481 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 TCFL5Q9UL49 500 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 CCDC88CQ9P219 2028 aa11.13□□□□□ -0.63
BRCA1-213ENST00000476777 PCSK5Q92824 1860 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 NIPBLQ6KC79 2804 aaeCLIP11.12□□□□□ -0.63
BRCA1-213ENST00000476777 ANKRD66B4E2M5 251 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 MEN1O00255 615 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 MATN3O15232 486 aa11.12□□□□□ -0.63
BRCA1-213ENST00000476777 MTX2O75431 263 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms