RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 MED26O95402 600 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 CBX6O95503 412 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 HLA-DQA2P01906 255 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 ALDOCP09972 364 aaKnown RBP6.84□□□□□ -1.31
LRCH3-215ENST00000476664 GPR89BP0CG08 455 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 IL7RP16871 459 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 ITIH1P19827 911 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 SLC37A1P57057 533 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 HSD11B2P80365 405 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 DEUP1Q05D60 604 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 GRSF1Q12849 480 aaKnown RBP eCLIP6.84□□□□□ -1.31
LRCH3-215ENST00000476664 MTA1Q13330 715 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 PPIL2Q13356 520 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 COL28A1Q2UY09 1125 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 CCDC40Q4G0X9 1142 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 KIF6Q6ZMV9 814 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 RBM43Q6ZSC3 357 aaKnown RBP6.84□□□□□ -1.31
LRCH3-215ENST00000476664 LPCAT2Q7L5N7 544 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 ABI3BPQ7Z7G0 1075 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 DTX2Q86UW9 622 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 LAS2Q8IYD9 372 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 OR56A1Q8NGH5 318 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 C9orf43Q8TAL5 461 aaPredicted RBP6.84□□□□□ -1.31
LRCH3-215ENST00000476664 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.84□□□□□ -1.31
LRCH3-215ENST00000476664 GDPD5Q8WTR4 605 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 ATOH1Q92858 354 aaPredicted RBP6.84□□□□□ -1.31
LRCH3-215ENST00000476664 CTHRC1Q96CG8 243 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 PABPC5Q96DU9 382 aaKnown RBP6.84□□□□□ -1.31
LRCH3-215ENST00000476664 KIRREL1Q96J84 757 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 BBS4Q96RK4 519 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 HNRNPABQ99729 332 aaKnown RBP6.84□□□□□ -1.31
LRCH3-215ENST00000476664 RNF26Q9BY78 433 aaPredicted RBP6.84□□□□□ -1.31
LRCH3-215ENST00000476664 ACTRT3Q9BYD9 372 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 RTN4RQ9BZR6 473 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 AMBRA1Q9C0C7 1298 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 NUAK2Q9H093 628 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 CNOT10Q9H9A5 744 aaKnown RBP6.84□□□□□ -1.31
LRCH3-215ENST00000476664 COX16Q9P0S2 106 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 MGAT4CQ9UBM8 478 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 HEY2Q9UBP5 337 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 FBXO40Q9UH90 709 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 FBXW11Q9UKB1 542 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 SNX7Q9UNH6 387 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 WDR37Q9Y2I8 494 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 TDRKHQ9Y2W6 561 aaKnown RBP6.84□□□□□ -1.31
LRCH3-215ENST00000476664 PCDHAC2Q9Y5I4 1007 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 SPTBN2O15020 2390 aa6.84□□□□□ -1.31
LRCH3-215ENST00000476664 TECTAO75443 2155 aa6.84□□□□□ -1.32
LRCH3-215ENST00000476664 SALL3Q9BXA9 1300 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 ZZEF1O43149 2961 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.83□□□□□ -1.32
LRCH3-215ENST00000476664 AP3B1O00203 1094 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 SLC16A3O15427 465 aaKnown RBP6.83□□□□□ -1.32
LRCH3-215ENST00000476664 DAB1O75553 588 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 TGFB1P01137 390 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 HIST1H2ABP04908 130 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 TNFRSF1AP19438 455 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 HIST1H2ADP20671 130 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 KELP23276 732 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 TYK2P29597 1187 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 ASMTP46597 345 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 ADPRHP54922 357 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 RAE1P78406 368 aaKnown RBP6.83□□□□□ -1.32
LRCH3-215ENST00000476664 ECT2LQ008S8 904 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 SP2Q02086 613 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 RBPJQ06330 500 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 GAMTQ14353 236 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 RPE65Q16518 533 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 RNF151Q2KHN1 245 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 KRT24Q2M2I5 525 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 RARS2Q5T160 578 aaKnown RBP6.83□□□□□ -1.32
LRCH3-215ENST00000476664 CCDC183Q5T5S1 534 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 MFSD7Q6UXD7 560 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 HIST3H2AQ7L7L0 130 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 PLEKHH3Q7Z736 793 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 ADGRF3Q8IZF5 1079 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 URGCPQ8TCY9 931 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 BRSK1Q8TDC3 778 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 TMEM125Q96AQ2 219 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 MIB2Q96AX9 1013 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 C5orf30Q96GV9 206 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 NTPCRQ9BSD7 190 aaKnown RBP6.83□□□□□ -1.32
LRCH3-215ENST00000476664 SPATC1LQ9H0A9 340 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 MMRN2Q9H8L6 949 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 PRMT8Q9NR22 394 aaPredicted RBP6.83□□□□□ -1.32
LRCH3-215ENST00000476664 ABHD10Q9NUJ1 306 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 MBNL3Q9NUK0 354 aaKnown RBP6.83□□□□□ -1.32
LRCH3-215ENST00000476664 TMEM248Q9NWD8 314 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.83□□□□□ -1.32
LRCH3-215ENST00000476664 COPG2Q9UBF2 871 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 HECAQ9UBI9 543 aaPredicted RBP6.83□□□□□ -1.32
LRCH3-215ENST00000476664 ADAMTS6Q9UKP5 1117 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 B3GNT3Q9Y2A9 372 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 PLXNB2O15031 1838 aa6.83□□□□□ -1.32
LRCH3-215ENST00000476664 SPEGQ15772 3267 aa6.82□□□□□ -1.32
LRCH3-215ENST00000476664 SH3D21A4FU49 640 aa6.82□□□□□ -1.32
LRCH3-215ENST00000476664 MCIDASD6RGH6 385 aa6.82□□□□□ -1.32
LRCH3-215ENST00000476664 NPIPB11E5RHQ5 1161 aa6.82□□□□□ -1.32
LRCH3-215ENST00000476664 LCE2BO14633 110 aa6.82□□□□□ -1.32
LRCH3-215ENST00000476664 OGG1O15527 345 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms