RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 PLA2G4EQ3MJ16 856 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 MRNIPQ6NTE8 343 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 PACS1Q6VY07 963 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 ART4Q93070 314 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 SGF29Q96ES7 293 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 APOLD1Q96LR9 279 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 FCRL3Q96P31 734 aaPredicted RBP29.13■■■□□ 2.25
HOXB3-208ENST00000476342 L2HGDHQ9H9P8 463 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 KCNK6Q9Y257 313 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 ST14Q9Y5Y6 855 aa29.13■■■□□ 2.25
HOXB3-208ENST00000476342 ZCWPW2A0A1B0GU75 182 aa29.12■■■□□ 2.25
HOXB3-208ENST00000476342 ARCN1P48444 511 aaKnown RBP29.12■■■□□ 2.25
HOXB3-208ENST00000476342 TTPAP49638 278 aa29.12■■■□□ 2.25
HOXB3-208ENST00000476342 PLTPP55058 493 aa29.12■■■□□ 2.25
HOXB3-208ENST00000476342 DAB2P98082 770 aa29.12■■■□□ 2.25
HOXB3-208ENST00000476342 GUCY2DQ02846 1103 aa29.12■■■□□ 2.25
HOXB3-208ENST00000476342 BCL7AQ4VC05 210 aa29.12■■■□□ 2.25
HOXB3-208ENST00000476342 CENPUQ71F23 418 aa29.12■■■□□ 2.25
HOXB3-208ENST00000476342 GLRX5Q86SX6 157 aa29.12■■■□□ 2.25
HOXB3-208ENST00000476342 SERBP1Q8NC51 408 aaKnown RBP eCLIP29.12■■■□□ 2.25
HOXB3-208ENST00000476342 SEC14L1Q92503 715 aa29.12■■■□□ 2.25
HOXB3-208ENST00000476342 KLC4Q9NSK0 619 aa29.12■■■□□ 2.25
HOXB3-208ENST00000476342 QSOX1O00391 747 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 KCNJ13O60928 360 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 ELK3P41970 407 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 RPIAP49247 311 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 CLCNKAP51800 687 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 PDIA2Q13087 525 aaKnown RBP29.11■■■□□ 2.25
HOXB3-208ENST00000476342 CRYMQ14894 314 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 LONRF1Q17RB8 773 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 C11orf96Q7Z7L8 435 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 SDCCAG8Q86SQ7 713 aaPredicted RBP29.11■■■□□ 2.25
HOXB3-208ENST00000476342 ARL10Q8N8L6 244 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 CHMP2BQ9UQN3 213 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 TEX264Q9Y6I9 313 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 FAM169AQ9Y6X4 670 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 PIKFYVEQ9Y2I7 2098 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 ESYT3A0FGR9 886 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 KLHL33A6NCF5 533 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 B4DGG1 531 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 E7ESA3 106 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 PFDN6O15212 129 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 AP2A2O94973 939 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 CKMT2P17540 419 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 PMLP29590 882 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 PRLHRP49683 370 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 DUSP3P51452 185 aaPredicted RBP29.11■■■□□ 2.25
HOXB3-208ENST00000476342 THOC5Q13769 683 aaKnown RBP29.11■■■□□ 2.25
HOXB3-208ENST00000476342 SPANXN3Q5MJ09 141 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 AMZ2Q86W34 360 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 FBXO25Q8TCJ0 367 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 CCDC97Q96F63 343 aaPredicted RBP29.11■■■□□ 2.25
HOXB3-208ENST00000476342 OSGEPL1Q9H4B0 414 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 VPS37BQ9H9H4 285 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 FAM114A2Q9NRY5 505 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 SIRPGQ9P1W8 387 aa29.11■■■□□ 2.25
HOXB3-208ENST00000476342 MARCH4Q9P2E8 410 aaPredicted RBP29.11■■■□□ 2.25
HOXB3-208ENST00000476342 ZC3H7BQ9UGR2 993 aaKnown RBP29.11■■■□□ 2.25
HOXB3-208ENST00000476342 F8W8V4 182 aa29.1■■■□□ 2.25
HOXB3-208ENST00000476342 EIF3HO15372 352 aaKnown RBP eCLIP29.1■■■□□ 2.25
HOXB3-208ENST00000476342 CBLBQ13191 982 aa29.1■■■□□ 2.25
HOXB3-208ENST00000476342 SEMA3AQ14563 771 aa29.1■■■□□ 2.25
HOXB3-208ENST00000476342 NR0B2Q15466 257 aa29.1■■■□□ 2.25
HOXB3-208ENST00000476342 GPR150Q8NGU9 434 aa29.1■■■□□ 2.25
HOXB3-208ENST00000476342 ZDHHC1Q8WTX9 485 aa29.1■■■□□ 2.25
HOXB3-208ENST00000476342 EPB41L5Q9HCM4 733 aa29.1■■■□□ 2.25
HOXB3-208ENST00000476342 SPATS2LQ9NUQ6 558 aaKnown RBP29.1■■■□□ 2.25
HOXB3-208ENST00000476342 GULP1Q9UBP9 304 aa29.1■■■□□ 2.25
HOXB3-208ENST00000476342 SLC23A2Q9UGH3 650 aa29.1■■■□□ 2.25
HOXB3-208ENST00000476342 DNAJC16Q9Y2G8 782 aa29.1■■■□□ 2.25
HOXB3-208ENST00000476342 DCHS1Q96JQ0 3298 aa29.1■■■□□ 2.25
HOXB3-208ENST00000476342 GOLGA8KD6RF30 607 aa29.09■■■□□ 2.25
HOXB3-208ENST00000476342 GOLGA8TH3BQL2 631 aa29.09■■■□□ 2.25
HOXB3-208ENST00000476342 POP7O75817 140 aaKnown RBP29.09■■■□□ 2.25
HOXB3-208ENST00000476342 CKMT1AP12532 417 aa29.09■■■□□ 2.25
HOXB3-208ENST00000476342 OGNP20774 298 aaKnown RBP29.09■■■□□ 2.25
HOXB3-208ENST00000476342 KCNA4P22459 653 aa29.09■■■□□ 2.25
HOXB3-208ENST00000476342 HP1BP3Q5SSJ5 553 aaPredicted RBP29.09■■■□□ 2.25
HOXB3-208ENST00000476342 NEPROQ6NW34 567 aa29.09■■■□□ 2.25
HOXB3-208ENST00000476342 OGFOD3Q6PK18 319 aa29.09■■■□□ 2.25
HOXB3-208ENST00000476342 LMNTD2Q8IXW0 634 aa29.09■■■□□ 2.25
HOXB3-208ENST00000476342 SLC35F3Q8IY50 421 aa29.09■■■□□ 2.25
HOXB3-208ENST00000476342 GABPB2Q8TAK5 448 aaPredicted RBP29.09■■■□□ 2.25
HOXB3-208ENST00000476342 CALML6Q8TD86 181 aa29.09■■■□□ 2.25
HOXB3-208ENST00000476342 LINC00615Q96LM1 132 aaPredicted RBP29.09■■■□□ 2.25
HOXB3-208ENST00000476342 FAM129AQ9BZQ8 928 aa29.09■■■□□ 2.25
HOXB3-208ENST00000476342 FOXP3Q9BZS1 431 aa29.09■■■□□ 2.25
HOXB3-208ENST00000476342 PHACTR1Q9C0D0 580 aa29.09■■■□□ 2.25
HOXB3-208ENST00000476342 C20orf96Q9NUD7 363 aaPredicted RBP29.09■■■□□ 2.25
HOXB3-208ENST00000476342 DMGDHQ9UI17 866 aaKnown RBP29.09■■■□□ 2.25
HOXB3-208ENST00000476342 GIPC1O14908 333 aa29.08■■■□□ 2.25
HOXB3-208ENST00000476342 SGTAO43765 313 aa29.08■■■□□ 2.25
HOXB3-208ENST00000476342 SIM1P81133 766 aaPredicted RBP29.08■■■□□ 2.25
HOXB3-208ENST00000476342 DMPKQ09013 629 aa29.08■■■□□ 2.25
HOXB3-208ENST00000476342 TRADDQ15628 312 aa29.08■■■□□ 2.25
HOXB3-208ENST00000476342 SMAD1Q15797 465 aaKnown RBP29.08■■■□□ 2.25
HOXB3-208ENST00000476342 RNF187Q5TA31 235 aaPredicted RBP29.08■■■□□ 2.25
HOXB3-208ENST00000476342 ZDHHC24Q6UX98 284 aa29.08■■■□□ 2.25
HOXB3-208ENST00000476342 IGDCC3Q8IVU1 814 aa29.08■■■□□ 2.25
HOXB3-208ENST00000476342 ZBED8Q8IZ13 594 aa29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms