RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 TSPYL4Q9UJ04 414 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 RALYQ9UKM9 306 aaKnown RBP4.8□□□□□ -1.64
PTCD3-211ENST00000476215 PLAGL1Q9UM63 463 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 TMEM184BQ9Y519 407 aaPredicted RBP4.8□□□□□ -1.64
PTCD3-211ENST00000476215 PCDHGA5Q9Y5G8 931 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 KAT6BQ8WYB5 2073 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 UNC13AQ9UPW8 1703 aa4.8□□□□□ -1.64
PTCD3-211ENST00000476215 ZNF644Q9H582 1327 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-211ENST00000476215 OR5K3A6NET4 321 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 PRAC2D3DTV9 90 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 TMEM178BH3BS89 294 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 ZNHIT1O43257 154 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 LDB3O75112 727 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 EEF1A1P68104 462 aaKnown RBP4.79□□□□□ -1.64
PTCD3-211ENST00000476215 TMF1P82094 1093 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 PCLAFQ15004 111 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 IGSF11Q5DX21 431 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 EEF1A1P5Q5VTE0 462 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 OR7E24Q6IFN5 339 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 ASB18Q6ZVZ8 466 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 LINC00346Q8IVM7 164 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 LNX1Q8TBB1 728 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-211ENST00000476215 SLC22A18Q96BI1 424 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 DACH2Q96NX9 599 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 NEURL2Q9BR09 285 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 HGH1Q9BTY7 390 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 RTN4RQ9BZR6 473 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 GIMAP4Q9NUV9 329 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 TRMT1Q9NXH9 659 aaKnown RBP4.79□□□□□ -1.64
PTCD3-211ENST00000476215 WSB2Q9NYS7 404 aaPredicted RBP4.79□□□□□ -1.64
PTCD3-211ENST00000476215 TAS2R14Q9NYV8 317 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 RABGAP1Q9Y3P9 1069 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 DOCK7Q96N67 2140 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 PRAG1Q86YV5 1406 aa4.79□□□□□ -1.64
PTCD3-211ENST00000476215 LNP1A1A4G5 178 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 WDR1O75083 606 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 AVILO75366 819 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 PGM3O95394 542 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 FAM106CPP0CH98 169 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 NR2F2P24468 414 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 NMBRP28336 390 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 NNMTP40261 264 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 FUT6P51993 359 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 STAT2P52630 851 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 CTSCP53634 463 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 C16orf54Q6UWD8 224 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 ZNF534Q76KX8 674 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 GALNT13Q8IUC8 556 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 SCML4Q8N228 414 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 APPL2Q8NEU8 664 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 TMEM255BQ8WV15 326 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 PHF21AQ96BD5 680 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 TCP11L1Q9NUJ3 509 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 PSD3Q9NYI0 1048 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 RCC2Q9P258 522 aaKnown RBP4.78□□□□□ -1.64
PTCD3-211ENST00000476215 KLHL9Q9P2J3 617 aa4.78□□□□□ -1.64
PTCD3-211ENST00000476215 ZCWPW2A0A1B0GU75 182 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 PRSS44E7EML9 344 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 PLK4O00444 970 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 ADAMDEC1O15204 470 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 EIF3DO15371 548 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTCD3-211ENST00000476215 PRLRP16471 622 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 ZNF132P52740 706 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 RUNX1T1Q06455 604 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 CXCL9Q07325 125 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 FAM98BQ52LJ0 330 aaKnown RBP4.77□□□□□ -1.65
PTCD3-211ENST00000476215 STXBP5Q5T5C0 1151 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 FAM171BQ6P995 826 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 PLEKHM3Q6ZWE6 761 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 Q75L30 129 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 SLC9B2Q86UD5 537 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 EXOC3L1Q86VI1 746 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 NAGSQ8N159 534 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 MUC20Q8N307 709 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-211ENST00000476215 C1orf52Q8N6N3 182 aaKnown RBP4.77□□□□□ -1.65
PTCD3-211ENST00000476215 POC1AQ8NBT0 407 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 MCUQ8NE86 351 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 SPATA3Q8NHX4 192 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 PRPF31Q8WWY3 499 aaKnown RBP4.77□□□□□ -1.65
PTCD3-211ENST00000476215 SEMA6AQ9H2E6 1030 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 EVA1AQ9H8M9 152 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 CHMP1AQ9HD42 196 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-211ENST00000476215 KLHL1Q9NR64 748 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 MARCH4Q9P2E8 410 aaPredicted RBP4.77□□□□□ -1.65
PTCD3-211ENST00000476215 AMACRQ9UHK6 382 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 ZNF148Q9UQR1 794 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 DLGAP4Q9Y2H0 992 aa4.77□□□□□ -1.65
PTCD3-211ENST00000476215 LOC100509620A0A075B734 347 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 A0A1B0GUV1 79 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 ASPDHA6ND91 283 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 ANKRD66B4E2M5 251 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 NDUFS4O43181 175 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 FIBPO43427 364 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 ERAL1O75616 437 aaKnown RBP4.76□□□□□ -1.65
PTCD3-211ENST00000476215 AKR1B1P15121 316 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 TRIM21P19474 475 aaKnown RBP4.76□□□□□ -1.65
PTCD3-211ENST00000476215 DGKAP23743 735 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 RAD52P43351 418 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 HSD17B4P51659 736 aa4.76□□□□□ -1.65
PTCD3-211ENST00000476215 GAS1P54826 345 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms