RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 DTX3LQ8TDB6 740 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 TFB1MQ8WVM0 346 aaKnown RBP6.9□□□□□ -1.3
HDAC3-207ENST00000475549 RSC1A1Q92681 617 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 KRT35Q92764 455 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 HAUS1Q96CS2 278 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 SLC45A3Q96JT2 553 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 TEFMQ96QE5 360 aaKnown RBP6.9□□□□□ -1.3
HDAC3-207ENST00000475549 VPS35Q96QK1 796 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 FCRL5Q96RD9 977 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 ARHGAP9Q9BRR9 750 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 TIMM29Q9BSF4 260 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 HEMGNQ9BXL5 484 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.9□□□□□ -1.3
HDAC3-207ENST00000475549 SLC25A18Q9H1K4 315 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 OSGEPL1Q9H4B0 414 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 AKIRIN1Q9H9L7 192 aaPredicted RBP6.9□□□□□ -1.3
HDAC3-207ENST00000475549 WASH6PQ9NQA3 447 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 ZNHIT6Q9NWK9 470 aaKnown RBP6.9□□□□□ -1.3
HDAC3-207ENST00000475549 DDX56Q9NY93 547 aaKnown RBP6.9□□□□□ -1.3
HDAC3-207ENST00000475549 IL17CQ9P0M4 197 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 FAM153AQ9UHL3 310 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 INTUQ9ULD6 942 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 KCTD3Q9Y597 815 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 MRPS18BQ9Y676 258 aaKnown RBP6.9□□□□□ -1.3
HDAC3-207ENST00000475549 UNC13CQ8NB66 2214 aa6.9□□□□□ -1.3
HDAC3-207ENST00000475549 COL6A6A6NMZ7 2263 aa6.9□□□□□ -1.31
HDAC3-207ENST00000475549 MYO18BQ8IUG5 2567 aa6.9□□□□□ -1.31
HDAC3-207ENST00000475549 IGHV5-51A0A0C4DH38 117 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 AKR1B15C9JRZ8 316 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-207ENST00000475549 K7EM74 188 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 TOX3O15405 576 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-207ENST00000475549 PSTPIP1O43586 416 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 SGTAO43765 313 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 SPOPO43791 374 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 POP7O75817 140 aaKnown RBP6.89□□□□□ -1.31
HDAC3-207ENST00000475549 ZRANB2O95218 330 aaKnown RBP eCLIP6.89□□□□□ -1.31
HDAC3-207ENST00000475549 TIAF1O95411 115 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 VIPP01282 170 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 FURINP09958 794 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 PRKAR1AP10644 381 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 SLC2A4P14672 509 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 FOLR1P15328 257 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 IDSP22304 550 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 OAS2P29728 719 aaKnown RBP6.89□□□□□ -1.31
HDAC3-207ENST00000475549 ADRA1AP35348 466 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 STAT5AP42229 794 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 PPM1FP49593 454 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-207ENST00000475549 SEPHS1P49903 392 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 CSRP3P50461 194 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 FOXM1Q08050 763 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 INSCQ1MX18 579 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 TFDP3Q5H9I0 405 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 BORAQ6PGQ7 559 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 TMEM220Q6QAJ8 160 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 FAM151BQ6UXP7 276 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 CEACAM20Q6UY09 585 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 RANBP10Q6VN20 620 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 CERS6Q6ZMG9 384 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 FAM92BQ6ZTR7 304 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 PID1Q7Z2X4 250 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 PTRH1Q86Y79 214 aaKnown RBP6.89□□□□□ -1.31
HDAC3-207ENST00000475549 KATNAL2Q8IYT4 538 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 RCOR2Q8IZ40 523 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 BEND7Q8N7W2 519 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-207ENST00000475549 CCDC112Q8NEF3 446 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 GPR150Q8NGU9 434 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 KLHL6Q8WZ60 621 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 P3H4Q92791 437 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 ELMO2Q96JJ3 720 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 TGM7Q96PF1 710 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 OR6C1Q96RD1 312 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 NRTNQ99748 197 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 ZPBPQ9BS86 351 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 FAM117AQ9C073 453 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 EPB41L1Q9H4G0 881 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 ZNF768Q9H5H4 540 aaKnown RBP6.89□□□□□ -1.31
HDAC3-207ENST00000475549 CLMPQ9H6B4 373 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 GPN2Q9H9Y4 310 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-207ENST00000475549 RAD18Q9NS91 495 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 PCDHA13Q9Y5I0 950 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 ARL5AQ9Y689 179 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 DUSP10Q9Y6W6 482 aa6.89□□□□□ -1.31
HDAC3-207ENST00000475549 ARHGEF17Q96PE2 2063 aaPredicted RBP6.89□□□□□ -1.31
HDAC3-207ENST00000475549 FLNCQ14315 2725 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 SCN8AQ9UQD0 1980 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 GOLGA6L3A6NEY3 463 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 OR2AG2A6NM03 316 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 ZNF891A8MT65 544 aaPredicted RBP6.88□□□□□ -1.31
HDAC3-207ENST00000475549 PDZK1P1A8MUH7 402 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 SFTPCP11686 197 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 FGF5P12034 268 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 AMD1P17707 334 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 NELFEP18615 380 aaKnown RBP6.88□□□□□ -1.31
HDAC3-207ENST00000475549 FECHP22830 423 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 RBL1P28749 1068 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 MAGEA1P43355 309 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 CCR10P46092 362 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 CAPZBP47756 277 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 XIAPP98170 497 aa6.88□□□□□ -1.31
HDAC3-207ENST00000475549 DMPKQ09013 629 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms