RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 LATS2Q9NRM7 1088 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 SERGEFQ9UGK8 458 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 RNF112Q9ULX5 631 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 SCML1Q9UN30 329 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 DUSP12Q9UNI6 340 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 ARL2BPQ9Y2Y0 163 aa13.56□□□□□ -0.24
TRAF4-210ENST00000475329 DOCK9Q9BZ29 2069 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 SYCE1LA8MT33 242 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 A8MT66 165 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 BTN3A1O00481 513 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 ITM2AO43736 263 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 LYPLA1O75608 230 aaPredicted RBP13.55□□□□□ -0.24
TRAF4-210ENST00000475329 TM7SF2O76062 418 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 IPO13O94829 963 aaKnown RBP13.55□□□□□ -0.24
TRAF4-210ENST00000475329 HSPA4LO95757 839 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 TPBGLP0DKB5 382 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 CBSLP0DN79 551 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 IL9P15248 144 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 DGKAP23743 735 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 CBSP35520 551 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 GPR1P46091 355 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 NFKB2Q00653 900 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 ZBTB16Q05516 673 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 SFSWAPQ12872 951 aaKnown RBP13.55□□□□□ -0.24
TRAF4-210ENST00000475329 CCINQ13939 588 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 RCN2Q14257 317 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 TSNQ15631 228 aaKnown RBP13.55□□□□□ -0.24
TRAF4-210ENST00000475329 FOXR1Q6PIV2 292 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 NAPRTQ6XQN6 538 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 DET1Q7L5Y6 550 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 TMPRSS6Q8IU80 811 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 MYO1HQ8N1T3 1032 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 RPLP0P6Q8NHW5 317 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 STAG3L4Q8TBR4 150 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 NAT14Q8WUY8 206 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 EXT2Q93063 718 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 FAM131CQ96AQ9 280 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 THOC1Q96FV9 657 aaKnown RBP13.55□□□□□ -0.24
TRAF4-210ENST00000475329 ATOH8Q96SQ7 321 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 CYP4F12Q9HCS2 524 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 FBXL12Q9NXK8 326 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 MMP17Q9ULZ9 603 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 TMCO1Q9UM00 188 aa13.55□□□□□ -0.24
TRAF4-210ENST00000475329 NDRG2Q9UN36 371 aaKnown RBP13.55□□□□□ -0.24
TRAF4-210ENST00000475329 NEMP2A6NFY4 417 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 SHISA7A6NL88 538 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 SUPT3HB4E1H0 165 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 EIF3FO00303 357 aaPredicted RBP13.54□□□□□ -0.24
TRAF4-210ENST00000475329 CDC7O00311 574 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 KPNA5O15131 536 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 INPP4BO15327 924 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 PLRG1O43660 514 aaKnown RBP13.54□□□□□ -0.24
TRAF4-210ENST00000475329 NPHS1O60500 1241 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 MTX2O75431 263 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 SUPT3HO75486 399 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 SOD1P00441 154 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 FTH1P02794 183 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 SERPINB5P36952 375 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 KHDC1Q4VXA5 237 aaKnown RBP13.54□□□□□ -0.24
TRAF4-210ENST00000475329 CFAP157Q5JU67 520 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 KIAA1161Q6NSJ0 714 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 PIWIL4Q7Z3Z4 852 aaKnown RBP13.54□□□□□ -0.24
TRAF4-210ENST00000475329 RAB44Q7Z6P3 723 aaPredicted RBP13.54□□□□□ -0.24
TRAF4-210ENST00000475329 ADAMTSL2Q86TH1 951 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 CCNYL1Q8N7R7 359 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 C10orf82Q8WW14 230 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 SIPA1Q96FS4 1042 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 C20orf27Q9GZN8 174 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 DRC3Q9H069 523 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 SLC6A17Q9H1V8 727 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 ZNF395Q9H8N7 513 aaPredicted RBP13.54□□□□□ -0.24
TRAF4-210ENST00000475329 CD248Q9HCU0 757 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 NCKIPSDQ9NZQ3 722 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 IKZF3Q9UKT9 509 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 FZD4Q9ULV1 537 aa13.54□□□□□ -0.24
TRAF4-210ENST00000475329 ZFC3H1O60293 1989 aaKnown RBP13.53□□□□□ -0.24
TRAF4-210ENST00000475329 IGLON5A6NGN9 336 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 K7ESM1 405 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 UBXN8O00124 270 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 SNUPNO95149 360 aaKnown RBP13.53□□□□□ -0.24
TRAF4-210ENST00000475329 C7P10643 843 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 ENO3P13929 434 aaPredicted RBP13.53□□□□□ -0.24
TRAF4-210ENST00000475329 GFAPP14136 432 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 AOAHP28039 575 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 KCNC1P48547 511 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 NAGLUP54802 743 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 AGERQ15109 404 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 ACSBG2Q5FVE4 666 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 ZNF648Q5T619 568 aaPredicted RBP13.53□□□□□ -0.24
TRAF4-210ENST00000475329 ADAMTSL4Q6UY14 1074 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 ZNF852Q6ZMS4 543 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 TRIM67Q6ZTA4 783 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 USP30Q70CQ3 517 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 KBTBD6Q86V97 674 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 GPSM1Q86YR5 675 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 MAFAQ8NHW3 353 aaPredicted RBP13.53□□□□□ -0.24
TRAF4-210ENST00000475329 RFWD2Q8NHY2 731 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 FUBP1Q96AE4 644 aaKnown RBP13.53□□□□□ -0.24
TRAF4-210ENST00000475329 L3HYPDHQ96EM0 354 aa13.53□□□□□ -0.24
TRAF4-210ENST00000475329 TMEM237Q96Q45 408 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms