RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 LBPP18428 481 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 ME2P23368 584 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 DGKAP23743 735 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 CBSP35520 551 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 RGS4P49798 205 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 AGTR2P50052 363 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 ECT2LQ008S8 904 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 AGKQ53H12 422 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 COQ5Q5HYK3 327 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 CDKL4Q5MAI5 379 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 GPRC6AQ5T6X5 926 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 FAM219BQ5XKK7 198 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 LRRC66Q68CR7 880 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 PTRHD1Q6GMV3 140 aaKnown RBP9.69□□□□□ -0.86
USP39-214ENST00000474572 DPY19L3Q6ZPD9 716 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 SPATA19Q7Z5L4 167 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 DHDDSQ86SQ9 333 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 HOMEZQ8IX15 550 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 AHI1Q8N157 1196 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 PPFIBP2Q8ND30 876 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 FRS2Q8WU20 508 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 DLG3Q92796 817 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 ULK4Q96C45 1275 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 MRGPRX3Q96LB0 322 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 KCNA7Q96RP8 456 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 NPAS2Q99743 824 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 BBS2Q9BXC9 721 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 MRPL1Q9BYD6 325 aaKnown RBP9.69□□□□□ -0.86
USP39-214ENST00000474572 CIPCQ9C0C6 399 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 FBRSL1Q9HCM7 1045 aaKnown RBP9.69□□□□□ -0.86
USP39-214ENST00000474572 SLC52A3Q9NQ40 469 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 MRPL40Q9NQ50 206 aaKnown RBP9.69□□□□□ -0.86
USP39-214ENST00000474572 SDR39U1Q9NRG7 319 aaPredicted RBP9.69□□□□□ -0.86
USP39-214ENST00000474572 AIG1Q9NVV5 245 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 SMOXQ9NWM0 555 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 MYOFQ9NZM1 2061 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 SUCOQ9UBS9 1254 aaKnown RBP9.69□□□□□ -0.86
USP39-214ENST00000474572 CRLS1Q9UJA2 301 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 PTBP2Q9UKA9 531 aaKnown RBP9.69□□□□□ -0.86
USP39-214ENST00000474572 ASB1Q9Y576 335 aa9.69□□□□□ -0.86
USP39-214ENST00000474572 TNPO3Q9Y5L0 923 aaKnown RBP9.69□□□□□ -0.86
USP39-214ENST00000474572 DENND4AQ7Z401 1863 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 NEDD8-MDP1E9PL57 170 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 ZNF197O14709 1029 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 ACOT8O14734 319 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 LIN7AO14910 233 aaPredicted RBP9.68□□□□□ -0.86
USP39-214ENST00000474572 RAD51BO15315 384 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 FFAR2O15552 330 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 NRP2O60462 931 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 SNX2O60749 519 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 XYLBO75191 536 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 BCAS2O75934 225 aaPredicted RBP9.68□□□□□ -0.86
USP39-214ENST00000474572 CAPNS1P04632 268 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 RPSAP08865 295 aaKnown RBP9.68□□□□□ -0.86
USP39-214ENST00000474572 TYRP14679 529 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 EPCAMP16422 314 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 XRCC1P18887 633 aaPredicted RBP9.68□□□□□ -0.86
USP39-214ENST00000474572 UGT1A6P19224 532 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 UGT1A1P22309 533 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 UGT1A4P22310 534 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 PRDX3P30048 256 aaKnown RBP9.68□□□□□ -0.86
USP39-214ENST00000474572 UGT1A3P35503 534 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 UGT1A5P35504 534 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 IRS1P35568 1242 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 NSG1P42857 185 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 SPINT3P49223 89 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 SESN3P58005 492 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 DCDC1P59894 354 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 STX1BP61266 288 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 PSME3P61289 254 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 PTSQ03393 145 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 ART3Q13508 389 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 GRB7Q14451 532 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 MUM1Q2TAK8 710 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 TTLL9Q3SXZ7 439 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 TCHHL1Q5QJ38 904 aaPredicted RBP9.68□□□□□ -0.86
USP39-214ENST00000474572 LY6G5CQ5SRR4 150 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 IRAK1BP1Q5VVH5 260 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 TMEM215Q68D42 235 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 PDE12Q6L8Q7 609 aaKnown RBP9.68□□□□□ -0.86
USP39-214ENST00000474572 GDPD4Q6W3E5 623 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 TMEM126BQ8IUX1 230 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 KBTBD2Q8IY47 623 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 ADGRG2Q8IZP9 1017 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 MYO1HQ8N1T3 1032 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 ZBTB2Q8N680 514 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 EFCAB3Q8N7B9 438 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 OR2A12Q8NGT7 310 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 ZNF707Q96C28 371 aaPredicted RBP9.68□□□□□ -0.86
USP39-214ENST00000474572 ROPN1LQ96C74 230 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 DUS3LQ96G46 650 aaKnown RBP9.68□□□□□ -0.86
USP39-214ENST00000474572 CDRT15Q96T59 188 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 GPATCH1Q9BRR8 931 aaKnown RBP9.68□□□□□ -0.86
USP39-214ENST00000474572 C17orf80Q9BSJ5 609 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 HGH1Q9BTY7 390 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 FAM126AQ9BYI3 521 aaPredicted RBP9.68□□□□□ -0.86
USP39-214ENST00000474572 BRINP2Q9C0B6 783 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 SEMA4BQ9NPR2 832 aaPredicted RBP9.68□□□□□ -0.86
USP39-214ENST00000474572 PFDN4Q9NQP4 134 aa9.68□□□□□ -0.86
USP39-214ENST00000474572 SPATS2LQ9NUQ6 558 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms