RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 ZNF563Q8TA94 476 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 TMEM234Q8WY98 164 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 C12orf66Q96MD2 445 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 HIST1H2AAQ96QV6 131 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 GFM1Q96RP9 751 aaKnown RBP4.58□□□□□ -1.68
CCNL1-215ENST00000474539 CYP2S1Q96SQ9 504 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 EPN3Q9H201 632 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 TMEM245Q9H330 911 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 CLK4Q9HAZ1 481 aaKnown RBP4.58□□□□□ -1.68
CCNL1-215ENST00000474539 ARHGEF3Q9NR81 526 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.58□□□□□ -1.68
CCNL1-215ENST00000474539 GPR34Q9UPC5 381 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 SIK3Q9Y2K2 1263 aa4.58□□□□□ -1.68
CCNL1-215ENST00000474539 FAM86C2PA6NEL3 165 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 MAGEB3O15480 346 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 TGFB1I1O43294 461 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 ATMINO43313 823 aaPredicted RBP4.57□□□□□ -1.68
CCNL1-215ENST00000474539 RAD51CO43502 376 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 STBD1O95210 358 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 CA3P07451 260 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 ITGA2BP08514 1039 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 H2AFXP16104 143 aaPredicted RBP4.57□□□□□ -1.68
CCNL1-215ENST00000474539 PSMB4P28070 264 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 SOX6P35712 828 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 RAB28P51157 221 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 SLC7A9P82251 487 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 SLC7A5Q01650 507 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 BTKQ06187 659 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 DUOXA1Q1HG43 343 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 TSTD2Q5T7W7 516 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 KCTD16Q68DU8 428 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 GJB7Q6PEY0 223 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 CNSTQ6PJW8 725 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 TMEM220Q6QAJ8 160 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 CRTC3Q6UUV7 619 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 CHST15Q7LFX5 561 aaPredicted RBP4.57□□□□□ -1.68
CCNL1-215ENST00000474539 PROSER1Q86XN7 944 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 ARID3BQ8IVW6 561 aaPredicted RBP4.57□□□□□ -1.68
CCNL1-215ENST00000474539 DENND6AQ8IWF6 608 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 CPNE9Q8IYJ1 553 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 FAM46DQ8NEK8 389 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 SPPL2AQ8TCT8 520 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 GPR152Q8TDT2 470 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 DAZLQ92904 295 aaKnown RBP4.57□□□□□ -1.68
CCNL1-215ENST00000474539 RGMAQ96B86 450 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 DGAT2Q96PD7 388 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 CD180Q99467 661 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 CHP1Q99653 195 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 LMAN1LQ9HAT1 526 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 KCND1Q9NSA2 647 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 MOCS1Q9NZB8 636 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 KLHL42Q9P2K6 505 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 SIT1Q9Y3P8 196 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 PEAK1Q9H792 1746 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 WDR27A2RRH5 827 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 E9PBE3 544 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 F5H423 210 aaPredicted RBP4.57□□□□□ -1.68
CCNL1-215ENST00000474539 HAS3O00219 553 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 XKRYO14609 159 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 MAP2K7O14733 419 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 SLC22A2O15244 555 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 AKAP10O43572 662 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 PRAMEF1O95521 474 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 ITGBL1O95965 494 aaPredicted RBP4.57□□□□□ -1.68
CCNL1-215ENST00000474539 HSD3B1P14060 373 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 MYL12AP19105 171 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 CALB2P22676 271 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 HSD3B2P26439 372 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 MPIP34949 423 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 GNPDA1P46926 289 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 RPL14P50914 215 aaKnown RBP4.57□□□□□ -1.68
CCNL1-215ENST00000474539 CCR4P51679 360 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 ZNF155Q12901 538 aaPredicted RBP4.57□□□□□ -1.68
CCNL1-215ENST00000474539 PRKG2Q13237 762 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 SLC9A5Q14940 896 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 CLPPQ16740 277 aaPredicted RBP4.57□□□□□ -1.68
CCNL1-215ENST00000474539 GALNTL6Q49A17 601 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 SPIN4Q56A73 249 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 CCNYL2Q5T2Q4 361 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 ARHGAP40Q5TG30 622 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 BICRALQ6AI39 1079 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 METTL2BQ6P1Q9 378 aaKnown RBP4.57□□□□□ -1.68
CCNL1-215ENST00000474539 USP30Q70CQ3 517 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 CCDC80Q76M96 950 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 ZNF765Q7L2R6 523 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 TAS1R3Q7RTX0 852 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 C6orf120Q7Z4R8 191 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 ABHD12BQ7Z5M8 362 aaPredicted RBP4.57□□□□□ -1.68
CCNL1-215ENST00000474539 OAFQ86UD1 273 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 TMEM126BQ8IUX1 230 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 ZNF366Q8N895 744 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 ADCY4Q8NFM4 1077 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 FIBINQ8TAL6 211 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 SPOCK2Q92563 424 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 OTULINQ96BN8 352 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 LINGO1Q96FE5 620 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 KCTD14Q9BQ13 255 aaPredicted RBP4.57□□□□□ -1.68
CCNL1-215ENST00000474539 ZPBPQ9BS86 351 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 NOD2Q9HC29 1040 aa4.57□□□□□ -1.68
CCNL1-215ENST00000474539 TCF7L2Q9NQB0 619 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms