RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 LZTFL1Q9NQ48 299 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 WASH6PQ9NQA3 447 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 SMOXQ9NWM0 555 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 SCHIP1Q9P0W5 487 aaPredicted RBP11.01□□□□□ -0.65
CKS1B-206ENST00000474215 ZNF624Q9P2J8 865 aaPredicted RBP11.01□□□□□ -0.65
CKS1B-206ENST00000474215 PDP2Q9P2J9 529 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 SSUH2Q9Y2M2 353 aa11.01□□□□□ -0.65
CKS1B-206ENST00000474215 DNMT3AQ9Y6K1 912 aaPredicted RBP11.01□□□□□ -0.65
CKS1B-206ENST00000474215 PDZK1P1A8MUH7 402 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 LIASO43766 372 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 DUX1O43812 170 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 SRP72O76094 671 aaKnown RBP11□□□□□ -0.65
CKS1B-206ENST00000474215 VIPP01282 170 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 BRAFP15056 766 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 MSH3P20585 1137 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 MPSTP25325 297 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 RPL10P27635 214 aaKnown RBP11□□□□□ -0.65
CKS1B-206ENST00000474215 ETV5P41161 510 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 SLC19A1P41440 591 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 CTSCP53634 463 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 MAPK10P53779 464 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 EPHA4P54764 986 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 GDF10P55107 478 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 UBE2IP63279 158 aaKnown RBP11□□□□□ -0.65
CKS1B-206ENST00000474215 XIAPP98170 497 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 P3H1Q32P28 736 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 TMEM164Q5U3C3 297 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 TMEM220Q6QAJ8 160 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 AMZ2Q86W34 360 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 TRIM48Q8IWZ4 208 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 AGBL5Q8NDL9 886 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 OR13C4Q8NGS5 318 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 NCSTNQ92542 709 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 USP7Q93009 1102 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 RTP4Q96DX8 246 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 ZNF514Q96K75 400 aaPredicted RBP11□□□□□ -0.65
CKS1B-206ENST00000474215 B3GNT4Q9C0J1 378 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 EPB41L1Q9H4G0 881 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 ASB8Q9H765 288 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 LRRC40Q9H9A6 602 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 UCK1Q9HA47 277 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 EIF2AK3Q9NZJ5 1116 aaKnown RBP11□□□□□ -0.65
CKS1B-206ENST00000474215 TMEM9Q9P0T7 183 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 FKBPLQ9UIM3 349 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 ACSL6Q9UKU0 697 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 ZNF148Q9UQR1 794 aa11□□□□□ -0.65
CKS1B-206ENST00000474215 FAM208BQ5VWN6 2430 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 IGSF10Q6WRI0 2623 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 PRAMEF33A0A0G2JMD5 474 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 OR2AG2A6NM03 316 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 AGAP14A8MT82 685 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 LDB2O43679 373 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 PRAMEF10O60809 474 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 AP2A1O95782 977 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 THRAP10827 490 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 FGF3P11487 239 aaPredicted RBP10.99□□□□□ -0.65
CKS1B-206ENST00000474215 CCL4P13236 92 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 TPH1P17752 444 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 AKT1P31749 480 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 CSTF2P33240 577 aaKnown RBP eCLIP10.99□□□□□ -0.65
CKS1B-206ENST00000474215 HADHAP40939 763 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 MAPK9P45984 424 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 ZNF140P52738 457 aaPredicted RBP10.99□□□□□ -0.65
CKS1B-206ENST00000474215 DRG2P55039 364 aaKnown RBP10.99□□□□□ -0.65
CKS1B-206ENST00000474215 TMPRSS3P57727 454 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 CXADRP78310 365 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 TMPRSS15P98073 1019 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 DMPKQ09013 629 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 OASLQ15646 514 aaKnown RBP10.99□□□□□ -0.65
CKS1B-206ENST00000474215 SEPT7Q16181 437 aaKnown RBP10.99□□□□□ -0.65
CKS1B-206ENST00000474215 LONRF2Q1L5Z9 754 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 FNBP1LQ5T0N5 605 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 TMEM26Q6ZUK4 368 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 GPR155Q7Z3F1 870 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 LINC00523Q86TU6 105 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 TAB3Q8N5C8 712 aaPredicted RBP10.99□□□□□ -0.65
CKS1B-206ENST00000474215 C1orf54Q8WWF1 131 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 ULK4Q96C45 1275 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 SGF29Q96ES7 293 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 FCRL3Q96P31 734 aaPredicted RBP10.99□□□□□ -0.65
CKS1B-206ENST00000474215 ALS2CR12Q96Q35 445 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 TAAR9Q96RI9 348 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 TBC1D10AQ9BXI6 508 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 ZMYND15Q9H091 742 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 CPNE5Q9HCH3 593 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 SLC40A1Q9NP59 571 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 UNC13CQ8NB66 2214 aa10.99□□□□□ -0.65
CKS1B-206ENST00000474215 KLHL33A6NCF5 533 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 MGAT4DA6NG13 374 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 LILRA5A6NI73 299 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 OR52A4PA6NMU1 304 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 ERI2A8K979 691 aaKnown RBP10.98□□□□□ -0.65
CKS1B-206ENST00000474215 A8MU76 341 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 C9orf172C9J069 976 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 NRDCO43847 1150 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 HALP42357 657 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 CCZ1BP86790 482 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 CCZ1P86791 482 aaPredicted RBP10.98□□□□□ -0.65
CKS1B-206ENST00000474215 CLN3Q13286 438 aa10.98□□□□□ -0.65
CKS1B-206ENST00000474215 SNX1Q13596 522 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms