RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 GPSM1Q86YR5 675 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 DDIASQ8IXT1 998 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 PQLC1Q8N2U9 271 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 CBARPQ8N350 705 aaPredicted RBP7.56□□□□□ -1.2
CCDC171-205ENST00000472806 Q8N3U1 123 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 ICA1LQ8NDH6 482 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 ADCY4Q8NFM4 1077 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 ZNF483Q8TF39 744 aaPredicted RBP7.56□□□□□ -1.2
CCDC171-205ENST00000472806 GDPD5Q8WTR4 605 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 DDI1Q8WTU0 396 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 TWIST2Q8WVJ9 160 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 PYDC1Q8WXC3 89 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 PBXIP1Q96AQ6 731 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 ASB9Q96DX5 294 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 EXOC2Q96KP1 924 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 TUBGCP5Q96RT8 1024 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 YME1L1Q96TA2 773 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 GPR21Q99679 349 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 CLPBQ9H078 707 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 MUC13Q9H3R2 512 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 SMPD4Q9NXE4 827 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 ADA2Q9NZK5 511 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 IL17CQ9P0M4 197 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 PDP2Q9P2J9 529 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 DNMT3BQ9UBC3 853 aaKnown RBP7.56□□□□□ -1.2
CCDC171-205ENST00000472806 VPS51Q9UID3 782 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 TBX21Q9UL17 535 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 PPM1HQ9ULR3 514 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 FAM50BQ9Y247 325 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 OR51B4Q9Y5P0 310 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 CPQQ9Y646 472 aa7.56□□□□□ -1.2
CCDC171-205ENST00000472806 C15orf38-AP3S2A0A0A6YYH1 394 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 NPEPPSL1A6NEC2 478 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 GFRA2O00451 464 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 IFRD1O00458 451 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-205ENST00000472806 ANGPT2O15123 496 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 ATXN7O15265 892 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-205ENST00000472806 RAD51BO15315 384 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 HTRA2O43464 458 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-205ENST00000472806 SNAP91O60641 907 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 GJB3O75712 270 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 SMNDC1O75940 238 aaKnown RBP eCLIP7.55□□□□□ -1.2
CCDC171-205ENST00000472806 CDK14O94921 469 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 MATN4O95460 622 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 ESRRBO95718 433 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 CKMP06732 381 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 PDHA1P08559 390 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 ARAFP10398 606 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 CTSAP10619 480 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 MTHFD2P13995 350 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 DGKAP23743 735 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 GABRR2P28476 465 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 PIK3CGP48736 1102 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 SGSHP51688 502 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 PCBP4P57723 403 aaKnown RBP7.55□□□□□ -1.2
CCDC171-205ENST00000472806 C1QTNF8P60827 252 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 SNRPD1P62314 119 aaKnown RBP7.55□□□□□ -1.2
CCDC171-205ENST00000472806 TIAL1Q01085 375 aaKnown RBP eCLIP7.55□□□□□ -1.2
CCDC171-205ENST00000472806 BNIP2Q12982 314 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 MED21Q13503 144 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 LRP8Q14114 963 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 TRIM25Q14258 630 aaKnown RBP7.55□□□□□ -1.2
CCDC171-205ENST00000472806 PTPRCAPQ14761 206 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 OR4D1Q15615 310 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 TRIP10Q15642 601 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 RBBP7Q16576 425 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 CAPRIN2Q6IMN6 1127 aaKnown RBP7.55□□□□□ -1.2
CCDC171-205ENST00000472806 ANO7Q6IWH7 933 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 TMEM154Q6P9G4 183 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 TTC23LQ6PF05 361 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 PRR23BQ6ZRT6 265 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 GK5Q6ZS86 529 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 GPRIN3Q6ZVF9 776 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 ARPINQ7Z6K5 226 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 PDSS2Q86YH6 399 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 MYO1HQ8N1T3 1032 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 TMEM199Q8N511 208 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 ARL14EPQ8N8R7 260 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-205ENST00000472806 GOLM1Q8NBJ4 401 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 HIPK4Q8NE63 616 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 FIBINQ8TAL6 211 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 CD200R1Q8TD46 325 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 TRPC4APQ8TEL6 797 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 FUBP1Q96AE4 644 aaKnown RBP7.55□□□□□ -1.2
CCDC171-205ENST00000472806 ISG20Q96AZ6 181 aaKnown RBP7.55□□□□□ -1.2
CCDC171-205ENST00000472806 FAM136AQ96C01 138 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 MIEF2Q96C03 454 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 TUBGCP3Q96CW5 907 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 LINGO1Q96FE5 620 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 MARK4Q96L34 752 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 BIRC8Q96P09 236 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 NPAS2Q99743 824 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 HGH1Q9BTY7 390 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 EMILIN2Q9BXX0 1053 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 FAM126AQ9BYI3 521 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-205ENST00000472806 CEP44Q9C0F1 390 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 AKTIPQ9H8T0 292 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 ZFYVE1Q9HBF4 777 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 ABCB8Q9NUT2 735 aa7.55□□□□□ -1.2
CCDC171-205ENST00000472806 CACNA2D2Q9NY47 1150 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms