RNA–Protein interactions for RNA: ENST00000472524.1

CCDC88B-205, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 779 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-205ENST00000472524 PCDHGA4Q9Y5G9 962 aa15.48■□□□□ 0.07
CCDC88B-205ENST00000472524 GLYATL1P3A0A0U1RQE8 302 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 KCNN4O15554 427 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 UGT1A9O60656 530 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 ANXA9O76027 345 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 WISP1O95388 367 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 VIPP01282 170 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 ITGB2P05107 769 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 RBP3P10745 1247 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 UGT1A6P19224 532 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 UGT1A1P22309 533 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 UGT1A4P22310 534 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 RPL10P27635 214 aaKnown RBP15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 CD82P27701 267 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 PSMB4P28070 264 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 PTPN7P35236 360 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 UGT1A3P35503 534 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 CETN2P41208 172 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 EPHA4P54764 986 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 NFKB2Q00653 900 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 TMEM115Q12893 351 aaPredicted RBP15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 OLIG2Q13516 323 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 PTPRCAPQ14761 206 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 ZDHHC20Q5W0Z9 365 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 WDR74Q6RFH5 385 aaPredicted RBP15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 DTX1Q86Y01 620 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 AVL9Q8NBF6 648 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 ALG3Q92685 438 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 BAG1Q99933 345 aaPredicted RBP15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 APOL2Q9BQE5 337 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 ARHGAP9Q9BRR9 750 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 UGT1A7Q9HAW7 530 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 UGT1A10Q9HAW8 530 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 UGT1A8Q9HAW9 530 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 SLC39A1Q9NY26 324 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 EFR3BQ9Y2G0 817 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 B3GALT1Q9Y5Z6 326 aa15.47■□□□□ 0.07
CCDC88B-205ENST00000472524 LILRA5A6NI73 299 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 STMND1H3BQB6 276 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 STX7O15400 261 aaKnown RBP15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 STK10O94804 968 aaKnown RBP15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 PYGMP11217 842 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 ITGB6P18564 788 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 CA5AP35218 305 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 SLC19A1P41440 591 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 ARSDP51689 593 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 DRG2P55039 364 aaKnown RBP15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 PRPSAP1Q14558 356 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 ANKRD20A2Q5SQ80 823 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 ANKRD20A1Q5TYW2 823 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 ANKRD20A3Q5VUR7 823 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 LRRC57Q8N9N7 239 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 SPC24Q8NBT2 197 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 CCDC110Q8TBZ0 833 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 DESI2Q9BSY9 194 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 FAM117AQ9C073 453 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 B3GNT4Q9C0J1 378 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 STARD5Q9NSY2 213 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 ZNF624Q9P2J8 865 aaPredicted RBP15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 PDP2Q9P2J9 529 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 AMFRQ9UKV5 643 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 PACSIN2Q9UNF0 486 aaPredicted RBP15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 HEMK1Q9Y5R4 338 aaPredicted RBP15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 ARL5AQ9Y689 179 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 MYO18BQ8IUG5 2567 aa15.46■□□□□ 0.07
CCDC88B-205ENST00000472524 A0A0U1RQJ8 604 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 OR52A4PA6NMU1 304 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 TJP3O95049 919 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 PTMAP06454 111 aaKnown RBP15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 BRAFP15056 766 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 TYRP1P17643 537 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 VCLP18206 1134 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 XRCC1P18887 633 aaPredicted RBP15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 IDSP22304 550 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 CTSCP53634 463 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 GFERP55789 205 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 ITGA9Q13797 1035 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 TBR1Q16650 682 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 LDLRAP1Q5SW96 308 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 GPRC6AQ5T6X5 926 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 ANKS6Q68DC2 871 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 TMEM26Q6ZUK4 368 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 PEX26Q7Z412 305 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 ARHGAP22Q7Z5H3 698 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 C11orf96Q7Z7L8 435 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 BRSK1Q8TDC3 778 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 CXorf40BQ96DE9 158 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 DDA1Q9BW61 102 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 ZCCHC2Q9C0B9 1178 aaKnown RBP15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 EPB41L1Q9H4G0 881 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 PCDHGA3Q9Y5H0 932 aa15.45■□□□□ 0.06
CCDC88B-205ENST00000472524 PRR19A6NJB7 356 aa15.44■□□□□ 0.06
CCDC88B-205ENST00000472524 OR2AG2A6NM03 316 aa15.44■□□□□ 0.06
CCDC88B-205ENST00000472524 C2orf81A6NN90 581 aa15.44■□□□□ 0.06
CCDC88B-205ENST00000472524 B4E171 279 aa15.44■□□□□ 0.06
CCDC88B-205ENST00000472524 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.44■□□□□ 0.06
CCDC88B-205ENST00000472524 GAPDHSO14556 408 aaPredicted RBP15.44■□□□□ 0.06
CCDC88B-205ENST00000472524 UBXN7O94888 489 aa15.44■□□□□ 0.06
CCDC88B-205ENST00000472524 PRAMEF1O95521 474 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms