RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 CLCA4Q14CN2 919 aa9□□□□□ -0.97
SYN3-211ENST00000472027 TRIP13Q15645 432 aaPredicted RBP9□□□□□ -0.97
SYN3-211ENST00000472027 SEPT7Q16181 437 aaKnown RBP9□□□□□ -0.97
SYN3-211ENST00000472027 CLPPQ16740 277 aaPredicted RBP9□□□□□ -0.97
SYN3-211ENST00000472027 SKIDA1Q1XH10 827 aa9□□□□□ -0.97
SYN3-211ENST00000472027 MAP9Q49MG5 647 aa9□□□□□ -0.97
SYN3-211ENST00000472027 GPR33Q49SQ1 333 aa9□□□□□ -0.97
SYN3-211ENST00000472027 CCDC38Q502W7 563 aa9□□□□□ -0.97
SYN3-211ENST00000472027 ZRANB3Q5FWF4 1079 aa9□□□□□ -0.97
SYN3-211ENST00000472027 FNBP1LQ5T0N5 605 aa9□□□□□ -0.97
SYN3-211ENST00000472027 TTC27Q6P3X3 843 aa9□□□□□ -0.97
SYN3-211ENST00000472027 FOXR1Q6PIV2 292 aa9□□□□□ -0.97
SYN3-211ENST00000472027 WASH2PQ6VEQ5 465 aa9□□□□□ -0.97
SYN3-211ENST00000472027 NXPE1Q8N323 547 aa9□□□□□ -0.97
SYN3-211ENST00000472027 BEND7Q8N7W2 519 aaPredicted RBP9□□□□□ -0.97
SYN3-211ENST00000472027 WDR36Q8NI36 951 aaKnown RBP9□□□□□ -0.97
SYN3-211ENST00000472027 ACTRT1Q8TDG2 376 aa9□□□□□ -0.97
SYN3-211ENST00000472027 COG1Q8WTW3 980 aa9□□□□□ -0.97
SYN3-211ENST00000472027 NAT14Q8WUY8 206 aa9□□□□□ -0.97
SYN3-211ENST00000472027 FGF11Q92914 225 aa9□□□□□ -0.97
SYN3-211ENST00000472027 DCUN1D1Q96GG9 259 aa9□□□□□ -0.97
SYN3-211ENST00000472027 LIN37Q96GY3 246 aaPredicted RBP9□□□□□ -0.97
SYN3-211ENST00000472027 AHCYL2Q96HN2 611 aaKnown RBP9□□□□□ -0.97
SYN3-211ENST00000472027 ZNF514Q96K75 400 aaPredicted RBP9□□□□□ -0.97
SYN3-211ENST00000472027 SLC46A1Q96NT5 459 aa9□□□□□ -0.97
SYN3-211ENST00000472027 RANBP9Q96S59 729 aa9□□□□□ -0.97
SYN3-211ENST00000472027 NAP1L3Q99457 506 aaPredicted RBP9□□□□□ -0.97
SYN3-211ENST00000472027 COPS8Q99627 209 aa9□□□□□ -0.97
SYN3-211ENST00000472027 NUDT22Q9BRQ3 303 aa9□□□□□ -0.97
SYN3-211ENST00000472027 LDHAL6BQ9BYZ2 381 aaPredicted RBP9□□□□□ -0.97
SYN3-211ENST00000472027 STRADBQ9C0K7 418 aa9□□□□□ -0.97
SYN3-211ENST00000472027 SEMA6CQ9H3T2 930 aa9□□□□□ -0.97
SYN3-211ENST00000472027 EPB41L5Q9HCM4 733 aa9□□□□□ -0.97
SYN3-211ENST00000472027 WASH6PQ9NQA3 447 aa9□□□□□ -0.97
SYN3-211ENST00000472027 ZDHHC3Q9NYG2 299 aa9□□□□□ -0.97
SYN3-211ENST00000472027 SMARCAL1Q9NZC9 954 aa9□□□□□ -0.97
SYN3-211ENST00000472027 ZNF624Q9P2J8 865 aaPredicted RBP9□□□□□ -0.97
SYN3-211ENST00000472027 CPNE7Q9UBL6 633 aa9□□□□□ -0.97
SYN3-211ENST00000472027 WDR37Q9Y2I8 494 aa9□□□□□ -0.97
SYN3-211ENST00000472027 PCDHGA8Q9Y5G5 932 aa9□□□□□ -0.97
SYN3-211ENST00000472027 SCN8AQ9UQD0 1980 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 TRBV5-4A0A0C4DH59 114 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 HEATR9A2RTY3 570 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 PMS2P1A4D2B8 440 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 MGAT4DA6NG13 374 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 OR51F1A6NGY5 319 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 AGRPO00253 132 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 CES2O00748 559 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 ZNF185O15231 689 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 KRT37O76014 449 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 VIPP01282 170 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 RALBP11234 206 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 ACRV1P26436 265 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 RBMS1P29558 406 aaKnown RBP8.99□□□□□ -0.97
SYN3-211ENST00000472027 PBLDP30039 288 aaPredicted RBP8.99□□□□□ -0.97
SYN3-211ENST00000472027 COILP38432 576 aaPredicted RBP8.99□□□□□ -0.97
SYN3-211ENST00000472027 PPM1FP49593 454 aaPredicted RBP8.99□□□□□ -0.97
SYN3-211ENST00000472027 LIMK2P53671 638 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 ERVPABLB-1P60509 514 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 UBE2IP63279 158 aaKnown RBP8.99□□□□□ -0.97
SYN3-211ENST00000472027 CACNG1Q06432 222 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 EIF3IQ13347 325 aaKnown RBP8.99□□□□□ -0.97
SYN3-211ENST00000472027 LAMB3Q13751 1172 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 NFE2L1Q14494 772 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 GSE1Q14687 1217 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 CYP1B1Q16678 543 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 TBC1D25Q3MII6 688 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 BCL7AQ4VC05 210 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 PHF19Q5T6S3 580 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 TSTD2Q5T7W7 516 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 AGAP9Q5VTM2 703 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 METRNLQ641Q3 311 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 TMEM71Q6P5X7 295 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 IGF2-ASQ6U949 168 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 FAM83HQ6ZRV2 1179 aaPredicted RBP8.99□□□□□ -0.97
SYN3-211ENST00000472027 RAB11FIP2Q7L804 512 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 TAS2R42Q7RTR8 314 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 SERPINA9Q86WD7 417 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 SLITRK4Q8IW52 837 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 FBXO39Q8N4B4 442 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 AVL9Q8NBF6 648 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 OR13J1Q8NGT2 312 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 OR2L2Q8NH16 312 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 OR10G6Q8NH81 332 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 HEXDCQ8WVB3 486 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 NCSTNQ92542 709 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 CCDC97Q96F63 343 aaPredicted RBP8.99□□□□□ -0.97
SYN3-211ENST00000472027 LINC00615Q96LM1 132 aaPredicted RBP8.99□□□□□ -0.97
SYN3-211ENST00000472027 ZNF778Q96MU6 729 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 ZNF578Q96N58 590 aaPredicted RBP8.99□□□□□ -0.97
SYN3-211ENST00000472027 TBC1D10AQ9BXI6 508 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 ASCL3Q9NQ33 180 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 EIF2B3Q9NR50 452 aaKnown RBP8.99□□□□□ -0.97
SYN3-211ENST00000472027 SLC2A6Q9UGQ3 507 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 RIMKLBQ9ULI2 386 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 PYCARDQ9ULZ3 195 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 SNX12Q9UMY4 172 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 COL27A1Q8IZC6 1860 aaPredicted RBP8.99□□□□□ -0.97
SYN3-211ENST00000472027 MYLKQ15746 1914 aa8.99□□□□□ -0.97
SYN3-211ENST00000472027 ASPMQ8IZT6 3477 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms