RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 PSMA3P25788 255 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 CDC25CP30307 473 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 HNRNPH1P31943 449 aaKnown RBP6.54□□□□□ -1.36
SMC5-202ENST00000471372 RAD23BP54727 409 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 NAGLUP54802 743 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 SELENOVP59797 346 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 UBE2V1Q13404 147 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 MELKQ14680 651 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 ZNF284Q2VY69 593 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 CEP78Q5JTW2 689 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 DCST1Q5T197 706 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 FAM198BQ6UWH4 519 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 DLK2Q6UY11 383 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 C11orf57Q6ZUT1 292 aaPredicted RBP6.54□□□□□ -1.36
SMC5-202ENST00000471372 NRROSQ86YC3 692 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 SEMA6DQ8NFY4 1073 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 TMEM163Q8TC26 289 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 PDLIM5Q96HC4 596 aaKnown RBP6.54□□□□□ -1.36
SMC5-202ENST00000471372 HES6Q96HZ4 224 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 CAMK1GQ96NX5 476 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 ATP6V0BQ99437 205 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 PARK7Q99497 189 aaKnown RBP6.54□□□□□ -1.36
SMC5-202ENST00000471372 UTP14AQ9BVJ6 771 aaKnown RBP6.54□□□□□ -1.36
SMC5-202ENST00000471372 MOSPD1Q9UJG1 213 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 ODF2LQ9ULJ1 636 aa6.54□□□□□ -1.36
SMC5-202ENST00000471372 PA2G4Q9UQ80 394 aaKnown RBP6.54□□□□□ -1.36
SMC5-202ENST00000471372 ASTN2O75129 1339 aaPredicted RBP6.53□□□□□ -1.36
SMC5-202ENST00000471372 KCNU1A8MYU2 1149 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 ZNF814B7Z6K7 855 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 PPP6CO00743 305 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 IFIT3O14879 490 aaKnown RBP6.53□□□□□ -1.36
SMC5-202ENST00000471372 TIMM23O14925 209 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 MDM4O15151 490 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 ZIC3O60481 467 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 TCF4P15884 667 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 TKTP29401 623 aaKnown RBP6.53□□□□□ -1.36
SMC5-202ENST00000471372 ZNF75DP51815 510 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 LIMK1P53667 647 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 ST3GAL1Q11201 340 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 RPA4Q13156 261 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 SMC1AQ14683 1233 aaKnown RBP6.53□□□□□ -1.36
SMC5-202ENST00000471372 SYT16Q17RD7 645 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 ZXDCQ2QGD7 858 aaPredicted RBP6.53□□□□□ -1.36
SMC5-202ENST00000471372 SLC39A12Q504Y0 691 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 PARP10Q53GL7 1025 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 DNAJC21Q5F1R6 531 aaKnown RBP6.53□□□□□ -1.36
SMC5-202ENST00000471372 KCNT1Q5JUK3 1230 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 DNTTIP2Q5QJE6 756 aaKnown RBP6.53□□□□□ -1.36
SMC5-202ENST00000471372 SHEQ5VZ18 495 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 FRG2Q64ET8 278 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 DPY19L2P1Q6NXN4 242 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 TMEM270Q6UE05 265 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 SLC36A4Q6YBV0 504 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 DET1Q7L5Y6 550 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 PALB2Q86YC2 1186 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 EXD1Q8NHP7 514 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 ST6GALNAC6Q969X2 333 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 SPDL1Q96EA4 605 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 PRMT6Q96LA8 375 aaPredicted RBP6.53□□□□□ -1.36
SMC5-202ENST00000471372 APOLD1Q96LR9 279 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 MUS81Q96NY9 551 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 SEMA3CQ99985 751 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 THAP9Q9H5L6 903 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 MRPL44Q9H9J2 332 aaKnown RBP6.53□□□□□ -1.36
SMC5-202ENST00000471372 TINAGQ9UJW2 476 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 COG5Q9UP83 839 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 TMEM184BQ9Y519 407 aaPredicted RBP6.53□□□□□ -1.36
SMC5-202ENST00000471372 PCDHGA1Q9Y5H4 931 aa6.53□□□□□ -1.36
SMC5-202ENST00000471372 A0A087X1B8 175 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 ANKUB1A6NFN9 424 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 OOEPA6NGQ2 149 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 MANSC4A6NHS7 340 aaPredicted RBP6.52□□□□□ -1.37
SMC5-202ENST00000471372 PTGESO14684 152 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 WNT9BO14905 357 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 HSPA12AO43301 675 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 DANCRP0C864 163 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 EEF2P13639 858 aaKnown RBP6.52□□□□□ -1.37
SMC5-202ENST00000471372 HOXD9P28356 352 aaPredicted RBP6.52□□□□□ -1.37
SMC5-202ENST00000471372 ADARP55265 1226 aaKnown RBP6.52□□□□□ -1.37
SMC5-202ENST00000471372 PROK1P58294 105 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 SNRPEP62304 92 aaKnown RBP6.52□□□□□ -1.37
SMC5-202ENST00000471372 CDK3Q00526 305 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 ID2Q02363 134 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 FOXM1Q08050 763 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 PPA1Q15181 289 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 DECR1Q16698 335 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 SPATS1Q496A3 300 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 CCDC158Q5M9N0 1113 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 ZDHHC20Q5W0Z9 365 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 C15orf39Q6ZRI6 1047 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 ZNF534Q76KX8 674 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 ATG9AQ7Z3C6 839 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 PCDH20Q8N6Y1 951 aaKnown RBP6.52□□□□□ -1.37
SMC5-202ENST00000471372 EMC1Q8N766 993 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 SLC38A9Q8NBW4 561 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 OR2AK2Q8NG84 335 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 OR2AJ1Q8NGZ0 328 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 OTUB1Q96FW1 271 aaPredicted RBP6.52□□□□□ -1.37
SMC5-202ENST00000471372 TMEM237Q96Q45 408 aa6.52□□□□□ -1.37
SMC5-202ENST00000471372 OR6C1Q96RD1 312 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms