RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 CTSKP43235 329 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 TTPAP49638 278 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 NXPH1P58417 271 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 YPEL5P62699 121 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 RACK1P63244 317 aaKnown RBP9.74□□□□□ -0.85
SF3A1-207ENST00000471342 IRF9Q00978 393 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 SGCGQ13326 291 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 ITGA9Q13797 1035 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 PLA2G2CQ5R387 149 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 MRNIPQ6NTE8 343 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 PAQR3Q6TCH7 311 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 TAS2R42Q7RTR8 314 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 IQCHQ86VS3 1027 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 MFSD2AQ8NA29 543 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 DENND1AQ8TEH3 1009 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 ULK4Q96C45 1275 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 MRRFQ96E11 262 aaKnown RBP9.74□□□□□ -0.85
SF3A1-207ENST00000471342 PGM2Q96G03 612 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 COPS8Q99627 209 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 NRTNQ99748 197 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 OR2AG1Q9H205 316 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 CAPN10Q9HC96 672 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 FSCN3Q9NQT6 498 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 ZNF358Q9NW07 568 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 KCTD5Q9NXV2 234 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 ZFATQ9P243 1243 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 VWA7Q9Y334 891 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 DHRS7Q9Y394 339 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 PCDHGA2Q9Y5H1 932 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 DGKBQ9Y6T7 804 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 R4GN57 208 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 SPEGQ15772 3267 aa9.74□□□□□ -0.85
SF3A1-207ENST00000471342 EXOC1LA0A1B0GW35 172 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 PATE3B3GLJ2 98 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 TRIM49D1C9J1S8 452 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 TOR1BO14657 336 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 TNFRSF10CO14798 259 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 RASGRF2O14827 1237 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 PHGDHO43175 533 aaKnown RBP9.73□□□□□ -0.85
SF3A1-207ENST00000471342 ATP8B1O43520 1251 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 VEGFDO43915 354 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 SLCO2B1O94956 709 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 SLC25A14O95258 325 aaPredicted RBP9.73□□□□□ -0.85
SF3A1-207ENST00000471342 ESR1P03372 595 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 C2P06681 752 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 NFKBIAP25963 317 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 ACADLP28330 430 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 PDHA2P29803 388 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 AKT2P31751 481 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 CNR2P34972 360 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 PHBP35232 272 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 NSG1P42857 185 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 ETV4P43268 484 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 TNNT3P45378 269 aaPredicted RBP9.73□□□□□ -0.85
SF3A1-207ENST00000471342 CSNK1EP49674 416 aaKnown RBP9.73□□□□□ -0.85
SF3A1-207ENST00000471342 DMPKQ09013 629 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 SFSWAPQ12872 951 aaKnown RBP9.73□□□□□ -0.85
SF3A1-207ENST00000471342 THOC5Q13769 683 aaKnown RBP9.73□□□□□ -0.85
SF3A1-207ENST00000471342 GRB7Q14451 532 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 LDLRAP1Q5SW96 308 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 MROH9Q5TGP6 573 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 CES4AQ5XG92 561 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 TMEM220Q6QAJ8 160 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 ARMCX6Q7L4S7 300 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 DET1Q7L5Y6 550 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 HDXQ7Z353 690 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 CTAGE3PQ8IX95 158 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 RBFAQ8N0V3 343 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 SIDT2Q8NBJ9 832 aaKnown RBP9.73□□□□□ -0.85
SF3A1-207ENST00000471342 CALML6Q8TD86 181 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 KCNJ9Q92806 393 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 TSACCQ96A04 125 aaPredicted RBP9.73□□□□□ -0.85
SF3A1-207ENST00000471342 ATXN7L3BQ96GX2 97 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 MENTQ9BUN1 341 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 WDR26Q9H7D7 661 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 SNX15Q9NRS6 342 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 SCHIP1Q9P0W5 487 aaPredicted RBP9.73□□□□□ -0.85
SF3A1-207ENST00000471342 KLHL42Q9P2K6 505 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 CRLS1Q9UJA2 301 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 SUFUQ9UMX1 484 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 GPR34Q9UPC5 381 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 WDR37Q9Y2I8 494 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 PCDH15Q96QU1 1955 aa9.73□□□□□ -0.85
SF3A1-207ENST00000471342 LRP4O75096 1905 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 PRAMEF33A0A0G2JMD5 474 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 C17orf113A0A1B0GUU1 675 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 PRSS38A1L453 326 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 OR2AG2A6NM03 316 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 TLR4O00206 839 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 FPGTO14772 594 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 TPP1O14773 563 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 MAP3K13O43283 966 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 CDH16O75309 829 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 POP7O75817 140 aaKnown RBP9.72□□□□□ -0.85
SF3A1-207ENST00000471342 CDK14O94921 469 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 AP2A2O94973 939 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 THEGLP0DJG4 465 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 MTHFD2P13995 350 aa9.72□□□□□ -0.85
SF3A1-207ENST00000471342 ZNF7P17097 686 aaPredicted RBP9.72□□□□□ -0.85
SF3A1-207ENST00000471342 CD38P28907 300 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms